EST details — SGN-E292129
| Search information |
| Request: 292129 | Match: SGN-E292129 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82397 | Clone name: cLET-1-M5 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179554 is on microarray TOM1: SGN-S1-1-1.1.1.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C82397 [cLET-1-M5] | Trace: SGN-T102404 | EST: SGN-E292130 | Direction: 3' | Facility: TIGR |
| Clone: SGN-C179554 [TUS-32-A24] | Trace: SGN-T185963 | EST: SGN-E372468 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179554 [TUS-32-A24] | Trace: SGN-T185964 | EST: SGN-E372469 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292129 | Length: 469 bp (545 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E292129 [] (trimmed)
GTTTAAGCAACATTAGGGCAAGAAAGAATCTGTTATTCAAGGAACAGATTGCTCAACTGAAGGAAGAGGAAAAAATTCTATTGAAGGAAAATGTA
GACTTGAAAAAAAAGTGTCAGGTGCTACCATTGACTTTAACACCAGTTCCTCTAGTAGAGAAAGATGTTGAAAGACAAATAATGGAAGTTGAGAC
AGAGCTCTTTATAGGACTTCCAGAGACTAGAAAAAGTTCATATTGTCCTAATTTAAACACACTACCTACATTACTTTAATTGTCAAAATTGTTGG
GGTTTCAAGTTTTATATTAACACTGTAATTATAATTTATAGAGTTGTAATAATATAAACTACATTACTTAAATATAGTTTTTTTTTAATGTCTTG
AATCATTAGTTAGAGGAGAAGGTCTATCAGAAATAGCATATTTACCTCACAAAAGGTGAGGGTAAGATCTTGTATACAATAATTTGTCC
GACTTGAAAAAAAAGTGTCAGGTGCTACCATTGACTTTAACACCAGTTCCTCTAGTAGAGAAAGATGTTGAAAGACAAATAATGGAAGTTGAGAC
AGAGCTCTTTATAGGACTTCCAGAGACTAGAAAAAGTTCATATTGTCCTAATTTAAACACACTACCTACATTACTTTAATTGTCAAAATTGTTGG
GGTTTCAAGTTTTATATTAACACTGTAATTATAATTTATAGAGTTGTAATAATATAAACTACATTACTTAAATATAGTTTTTTTTTAATGTCTTG
AATCATTAGTTAGAGGAGAAGGTCTATCAGAAATAGCATATTTACCTCACAAAAGGTGAGGGTAAGATCTTGTATACAATAATTTGTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292129] | SGN-U582357 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102403 [Download][View] | Facility Assigned ID: TMEAA75TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.920 | Expected Error Rate: 0.0016 | Quality Trim Threshold: 14.5 |


