EST details — SGN-E292052
| Search information |
| Request: 292052 | Match: SGN-E292052 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C82144 | Clone name: cLET-1-A5 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C179378 is on microarray TOM1: SGN-S1-1-1.2.2.13
This clone has been mapped as cLET-1-A5.
| Additional sequencing |
| Clone: SGN-C82144 [cLET-1-A5] | Trace: SGN-T102325 | EST: SGN-E292051 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C179378 [TUS-31-J16] | Trace: SGN-T185582 | EST: SGN-E373444 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179378 [TUS-31-J16] | Trace: SGN-T185583 | EST: SGN-E373445 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E292052 | Length: 470 bp (561 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E292052 [] (trimmed)
AAAGATCAAAATCATATAACTTTAGTATTTCTGAAAATAAACTTCCATTTTTCTAAATGGGCATACAGAATCCCCTTATTGATTACATCCAAATA
TAACTTATAGACTTCACAACGTAATACATAAACATAATTTGCATTCTCTCTCTATATATAAATAAAGACGCTTAGCCCTGGGCGAAGTTCTTTTG
ATTGTTACAGTCCAAATTTTCACCAGTAGGAACATTCAACATACCACAATACCTCCTGTAAAATCCAATTCGACTTTCCGCTGCAGTATTCGGAC
CCATCCCACATTCAAATTGACCGTTAATGATGTTGGTAATGACACCGTACCCTGGAACTCTATTAGCTGCTGTATCTTTAGGGGATGGCGTCCAT
TGTCCAATGATAACGTTGTGGCATGATGGTTTATTATCCTGTTCTGTCATCCAGAACCATATTGCTGTTTTGAATGATATTATAGGATCT
TAACTTATAGACTTCACAACGTAATACATAAACATAATTTGCATTCTCTCTCTATATATAAATAAAGACGCTTAGCCCTGGGCGAAGTTCTTTTG
ATTGTTACAGTCCAAATTTTCACCAGTAGGAACATTCAACATACCACAATACCTCCTGTAAAATCCAATTCGACTTTCCGCTGCAGTATTCGGAC
CCATCCCACATTCAAATTGACCGTTAATGATGTTGGTAATGACACCGTACCCTGGAACTCTATTAGCTGCTGTATCTTTAGGGGATGGCGTCCAT
TGTCCAATGATAACGTTGTGGCATGATGGTTTATTATCCTGTTCTGTCATCCAGAACCATATTGCTGTTTTGAATGATATTATAGGATCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E292052] | SGN-U581507 | Tomato 200607 | Build 2 | 59 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102326 [Download][View] | Facility Assigned ID: TMEAA03TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.944 | Expected Error Rate: 0.0062 | Quality Trim Threshold: 14.5 |
Working
