EST details — SGN-C29099
| Search information |
| Request: 29099 | Match: SGN-C29099 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C29099 | Clone name: cLEF-50-C23 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C180406 is on microarray TOM1: SGN-S1-1-5.1.19.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180406 [TUS-34-E12] | Trace: SGN-T193774 | EST: SGN-E392448 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180406 [TUS-34-E12] | Trace: SGN-T193775 | EST: SGN-E392449 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E249154 | Length: 655 bp (892 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E249154 [] (trimmed)
AGGTTAACAGACCTCCATAATGTTATTATTGACTGTTGAAACAACATCCAGATACATTCTTACATCACATTAAGTTGCCTTGCATATAGCCATCA
ATGGTGAGAAACTAAAATGCAAGATATAATACAACAGTGGAAAATAGCCAACATACAACGAATAGAGAGATAATCTGGCTTGTCATCCACTAACA
TTTTCAGCAGACATGTCGTTCTCTTCATCACTTCCTTGACGTATTCTTGCAATTTCTGCCTGAGCTCTCTCCATAATTTGCCTCTTTTGGAGTTC
CAATTCTCGGTGGAAGTCCATCCTCATTTTCTCCAGTTCCATCATTTGCTGTCTCTTGCTATTCTCAATCTTCACATATATCTCACTAAATTTAT
GGATAGAATCTGCTATTAATTTGAAAGAATGTCCATTCCCATTCCCGTTCCCTCCTGGTTGTACATTTCTTGATCTTTTTGGTGGAAGATCCTCT
GAACCATCCTCCTCACCATCAGCAGATTCTGAGTTAGCAGGACTGTCCCTCATCTCATCCAAGCCATTAGCACGATTCAGATAAGCTTTTGGGCT
CATGAAAACATACTCTCCAGAGTCCATTCCACATGAAACACCAGCTTTCTGGGGAGTTGATGTTAGTAACATGTCCATCTTTTTG
ATGGTGAGAAACTAAAATGCAAGATATAATACAACAGTGGAAAATAGCCAACATACAACGAATAGAGAGATAATCTGGCTTGTCATCCACTAACA
TTTTCAGCAGACATGTCGTTCTCTTCATCACTTCCTTGACGTATTCTTGCAATTTCTGCCTGAGCTCTCTCCATAATTTGCCTCTTTTGGAGTTC
CAATTCTCGGTGGAAGTCCATCCTCATTTTCTCCAGTTCCATCATTTGCTGTCTCTTGCTATTCTCAATCTTCACATATATCTCACTAAATTTAT
GGATAGAATCTGCTATTAATTTGAAAGAATGTCCATTCCCATTCCCGTTCCCTCCTGGTTGTACATTTCTTGATCTTTTTGGTGGAAGATCCTCT
GAACCATCCTCCTCACCATCAGCAGATTCTGAGTTAGCAGGACTGTCCCTCATCTCATCCAAGCCATTAGCACGATTCAGATAAGCTTTTGGGCT
CATGAAAACATACTCTCCAGAGTCCATTCCACATGAAACACCAGCTTTCTGGGGAGTTGATGTTAGTAACATGTCCATCTTTTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E249154] | SGN-U566395 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T62662 [Download][View] | Facility Assigned ID: TMGHO24TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0065 | Quality Trim Threshold: 14.5 |
Working
