EST details — SGN-E290988
| Search information |
| Request: 290988 | Match: SGN-E290988 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C88507 | Clone name: cLET-8-H21 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C184675 is on microarray TOM1: SGN-S1-1-8.3.14.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184675 [TUS-45-G9] | Trace: SGN-T198564 | EST: SGN-E397238 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184675 [TUS-45-G9] | Trace: SGN-T200009 | EST: SGN-E398683 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290988 | Length: 541 bp (716 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290988 [] (trimmed)
TTACATTTGTAAGTGTATTGTGTCTTTCCATTTTAGCTCCAAATAGTCCTTTTGCAACCAAAATCTTGTCTGAGATTTTTCTATATTTGGGATTG
ATCTAAAGATATGGTTCGAGGTAAAACCCAGATGAGGCGTATAGAGAACGCCACAAGCAGACAAGTTACTTTCTCAAAGAGAAGAAATGGTTTGC
TAAAAAAAGCTTTTGAGCTTTCTGTCTTATGTGATGCTGAAGTGGGATTGATTATATTTTCTCCAAGAGGAAAACTATATGAATTTGCTAGTTCA
AGCATACCTGAGGTAATTGAACGATATAAGAGGCATACTAAAGATAAAGTTAAATCTGATGAAAATCAATCTGTGGATATTCAGCATACTAAGCA
AGAGACAGCAAGTTTGATGAAGAAGATAGAACTCCTTGAATCATCTAAAAGGAAACTCTTGGGAGAAGGTTTAGGATCATGCAGCCTTGAAGAAG
TTCAACAATTAGAGAAGCAATTGGAGCAGAGTGTCATTACTATTAGGGCTCGAAAGATGCAAGTCT
ATCTAAAGATATGGTTCGAGGTAAAACCCAGATGAGGCGTATAGAGAACGCCACAAGCAGACAAGTTACTTTCTCAAAGAGAAGAAATGGTTTGC
TAAAAAAAGCTTTTGAGCTTTCTGTCTTATGTGATGCTGAAGTGGGATTGATTATATTTTCTCCAAGAGGAAAACTATATGAATTTGCTAGTTCA
AGCATACCTGAGGTAATTGAACGATATAAGAGGCATACTAAAGATAAAGTTAAATCTGATGAAAATCAATCTGTGGATATTCAGCATACTAAGCA
AGAGACAGCAAGTTTGATGAAGAAGATAGAACTCCTTGAATCATCTAAAAGGAAACTCTTGGGAGAAGGTTTAGGATCATGCAGCCTTGAAGAAG
TTCAACAATTAGAGAAGCAATTGGAGCAGAGTGTCATTACTATTAGGGCTCGAAAGATGCAAGTCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290988] | SGN-U583095 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104384 [Download][View] | Facility Assigned ID: TMEBE47TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 14.5 |
Working
