EST details — SGN-E290780
| Search information |
| Request: 290780 | Match: SGN-E290780 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C79822 | Clone name: cLET-10-E15 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C185641 is on microarray TOM1: SGN-S1-1-2.3.9.5
See unigene SGN-U581507 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C185641 [TUS-47-O15] | Trace: SGN-T192101 | EST: SGN-E390775 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185641 [TUS-47-O15] | Trace: SGN-T197629 | EST: SGN-E396303 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290780 | Length: 649 bp (878 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290780 [] (trimmed)
GAAAAATGAAGTTCAATATTGTATCACCCGTTGCACTGTCTTGTCTCTTTTTCTTGTTCCTAACAGGTACTTTAGCACAAAATGCCGGTTCCATT
GTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGC
AGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTA
ATGGTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTG
ACACACCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGACAAGAGTTAGTGAACAACCCTGATTTAGTTGCGACAGATCCTATAAT
ATCATTCAAAACAGCAATATGGTTCTGGATGACAGAACAGGATAATAAACCATCATGCCACAACGTTATCATTGGACAATGGACGCCATCCCCTA
AAGATACAGCAGCTAATAGAGTTCCAGGGTACGGTGTCATTACCAACATCATTAACGGTCAATTTGAATGTGGGATGGG
GTAACGCGGGAATTGTTCGAACAAATGCTGAGTTTTAGGAACAATGACGCATGTCCTGCCAAAGGATTCTACACTTATGATGCATTCATAGCTGC
AGCCAATTCGTTTCCAGGTTTTGGTACTGCTGGTGATGATACTGCACGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACATCTCACGAAACTA
ATGGTGGTAGTGCAGGAACATTCACTGGAGGATATTGCTTTGTTAAGCAAATAGAGCAGTCAGACAGATACTATGGCAGAGGACCTATCCAATTG
ACACACCAATCTAACTACGAACGAGCTGGACAAGGTATTGGTGTTGGACAAGAGTTAGTGAACAACCCTGATTTAGTTGCGACAGATCCTATAAT
ATCATTCAAAACAGCAATATGGTTCTGGATGACAGAACAGGATAATAAACCATCATGCCACAACGTTATCATTGGACAATGGACGCCATCCCCTA
AAGATACAGCAGCTAATAGAGTTCCAGGGTACGGTGTCATTACCAACATCATTAACGGTCAATTTGAATGTGGGATGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290780] | SGN-U581507 | Tomato 200607 | Build 2 | 59 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T104949 [Download][View] | Facility Assigned ID: TMEBK32TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0096 | Quality Trim Threshold: 14.5 |
Working
