EST details — SGN-E290608
| Search information |
| Request: 290608 | Match: SGN-E290608 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77140 | Clone name: cLES-20-B14 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179236 is on microarray TOM1: SGN-S1-1-7.4.2.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179236 [TUS-31-D18] | Trace: SGN-T185547 | EST: SGN-E373409 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179236 [TUS-31-D18] | Trace: SGN-T185548 | EST: SGN-E373410 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290608 | Length: 534 bp (882 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290608 [] (trimmed)
GGCTGAAAAATTAGCCCCTGAGAAACGTCACAGCTTCGTTCATAATGGCCAGAAGGTGTTCGAATGGGACCAAACGCTTGAAGAATTGAACATTT
ACATAACTCTTCCAGAAAATGTTCCGAAGAAGCTATTTTATTGCAAGGTTGAGTCTAAGCATTTGGAAGTTGGGATCAAAGGCAATCCACCTTAC
CTTAATCATGATCTGATGAACCCAGTGAAGACCGATTGTTCCTTCTGGACTCTAGAGGATGATATACTGCATGTAACCTTACAGAAGAGGGATAA
AGGTCAGACATGGTCTTCTCCTATATTGGGCCAAGGACAGTTGGATCCATATGCCAGTGATCTTGAACAGAAAAGGCTCATGCTTCAAAGGTTCC
AAGAAGAGAATCCCGGTTTTGATTTCTCACAGGCACAATTCTCTGGGAATTGTCCTGATCCAAAGACCTTCATGGGGGGAATTAGCTCAACTTGA
TACTGCTCTATTATCATTGTAACTATGGACCTAACTAGATATGCATTGTTATGATGAGA
ACATAACTCTTCCAGAAAATGTTCCGAAGAAGCTATTTTATTGCAAGGTTGAGTCTAAGCATTTGGAAGTTGGGATCAAAGGCAATCCACCTTAC
CTTAATCATGATCTGATGAACCCAGTGAAGACCGATTGTTCCTTCTGGACTCTAGAGGATGATATACTGCATGTAACCTTACAGAAGAGGGATAA
AGGTCAGACATGGTCTTCTCCTATATTGGGCCAAGGACAGTTGGATCCATATGCCAGTGATCTTGAACAGAAAAGGCTCATGCTTCAAAGGTTCC
AAGAAGAGAATCCCGGTTTTGATTTCTCACAGGCACAATTCTCTGGGAATTGTCCTGATCCAAAGACCTTCATGGGGGGAATTAGCTCAACTTGA
TACTGCTCTATTATCATTGTAACTATGGACCTAACTAGATATGCATTGTTATGATGAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290608] | SGN-U580617 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102287 [Download][View] | Facility Assigned ID: TPSDB07TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.965 | Expected Error Rate: 0.0140 | Quality Trim Threshold: 12.5 |
Working
