EST details — SGN-E290581
| Search information |
| Request: 290581 | Match: SGN-E290581 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77281 | Clone name: cLES-20-H23 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179297 is on microarray TOM1: SGN-S1-1-2.3.2.8
See unigene SGN-U580309 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C179297 [TUS-31-G7] | Trace: SGN-T185032 | EST: SGN-E372575 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179297 [TUS-31-G7] | Trace: SGN-T185033 | EST: SGN-E372576 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290581 | Length: 294 bp (989 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290581 [] (trimmed)
CAGAAGGATTCCAGCTACAGAGCTGTTTGCAAGGGTTGATGCTGTGGATGCTAGCACCATCAAACGAGTTGCAAACAGATTTATCTTTGACCAGG
ATGTTGCTATATCCGCGCTGGGGCCTATCCAGACACTACCTGATTATAACTGGTTCAGACGCAGAACCTACATGCTCCGTTATTAGACGATTCTT
TTTTTTCTTTTTTTGGAGTTGTAATGCATCACAATTACACACCTCGCTCGACCATTCCAAACTTGGACATATAGGTCTTACTTTTCCAATTCTTC
CTCTTGCCT
ATGTTGCTATATCCGCGCTGGGGCCTATCCAGACACTACCTGATTATAACTGGTTCAGACGCAGAACCTACATGCTCCGTTATTAGACGATTCTT
TTTTTTCTTTTTTTGGAGTTGTAATGCATCACAATTACACACCTCGCTCGACCATTCCAAACTTGGACATATAGGTCTTACTTTTCCAATTCTTC
CTCTTGCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290581] | SGN-U580309 | Tomato 200607 | Build 2 | 67 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102260 [Download][View] | Facility Assigned ID: TPSDA48TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0176 | Quality Trim Threshold: 12.5 |
Working
