EST details — SGN-E290503
| Search information |
| Request: 290503 | Match: SGN-E290503 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77298 | Clone name: cLES-20-I19 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179303 is on microarray TOM1: SGN-S1-1-4.3.2.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179303 [TUS-31-G13] | Trace: SGN-T185121 | EST: SGN-E372664 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179303 [TUS-31-G13] | Trace: SGN-T185122 | EST: SGN-E372665 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290503 | Length: 559 bp (830 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290503 [] (trimmed)
CTTTTTCGCCCAAAGCTTATTATTGCTGGTGCAAGTGCATATCCGCGTGATTTTGATTATCCTCGTTTGAGAAAGATAGCAGATGCTGTTGGAGC
TTTCCTAATGATGGATATGGCTCATATCAGTGGGCTTGTAGCTGCTTCTGTACTTGCTAATCCATTTGAATACTGTGACATTGTTACTACTACTA
CTCACAAGTCTCTTAGAGGTCCTAGAGGTGGAATGATCTTCTTCAAAAAAGATCCAGTTCTGGGAATGGATCTTGAATCTGCCATAAACAATGCT
GTTTTTCCTGGTTTGCAGGGTGGTCCTCATAATCACACAATTGGAGGACTAGCTGTTTGCTTGAAGCATGCCAAATCACCTGAATTTAAGGTTTA
TCAGAACCAGGTGGTTGCCAACTGTAGAGCTCTTGCAAGCCGATTAATGGAATTAGGCTACAAGCTGGTCTCAGGAGGGAGCGACAATCATTTGG
TTCTTGTGGATTTGCGGCCCATGGGAATTGATGGTGCTAGAGTGGAGAAAATACTCGACATGGCATCAATCACTCTCAATAAGA
TTTCCTAATGATGGATATGGCTCATATCAGTGGGCTTGTAGCTGCTTCTGTACTTGCTAATCCATTTGAATACTGTGACATTGTTACTACTACTA
CTCACAAGTCTCTTAGAGGTCCTAGAGGTGGAATGATCTTCTTCAAAAAAGATCCAGTTCTGGGAATGGATCTTGAATCTGCCATAAACAATGCT
GTTTTTCCTGGTTTGCAGGGTGGTCCTCATAATCACACAATTGGAGGACTAGCTGTTTGCTTGAAGCATGCCAAATCACCTGAATTTAAGGTTTA
TCAGAACCAGGTGGTTGCCAACTGTAGAGCTCTTGCAAGCCGATTAATGGAATTAGGCTACAAGCTGGTCTCAGGAGGGAGCGACAATCATTTGG
TTCTTGTGGATTTGCGGCCCATGGGAATTGATGGTGCTAGAGTGGAGAAAATACTCGACATGGCATCAATCACTCTCAATAAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290503] | SGN-U565354 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102182 [Download][View] | Facility Assigned ID: TPSCY58TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0056 | Quality Trim Threshold: 14.5 |
Working
