EST details — SGN-E290439
| Search information |
| Request: 290439 | Match: SGN-E290439 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77185 | Clone name: cLES-20-D2 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185579 is on microarray TOM1: SGN-S1-1-8.1.9.1
See unigene SGN-U579791 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C185579 [TUS-47-M1] | Trace: SGN-T192598 | EST: SGN-E391272 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185579 [TUS-47-M1] | Trace: SGN-T197627 | EST: SGN-E396301 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290439 | Length: 558 bp (872 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290439 [] (trimmed)
CCAAAAACAAAAAAATGGCAACCATTGCTGGTGTTAGTCTCACTAGTCCAAAATTCTTGGCCAAGAATTCCAACTCCCCCAATTTTAAGCCATTT
AAGTTGCCCTGCCTTAACAATCCATGGAAAAAATCATCAACAAAATTTGGTCTTGTGTGTTCAGCAGCACCAGATAACAAGCTTTCTGACCTTGT
GGCTGATAGTGTTAAAGGGGCAGAGGAAACGTGCAATGAGAACCCGGCTAGCGGAGAATGCGCGGCGGCTTGGGATGTTGTGGAAGAGGCAAGTG
CAGCGGCTAGTCATGCAAGGGACAAGAAGAAGCAGGAAGATGTTTTGGAAAATTATTGCAAGGAAAATCCAGAGACTGATGAGTGCCGTACATAT
GATAATTGATAGTGTACTAGTTTTGTGTTATTTAAGCACTCCGCTCTATTTTATTCCCAATTTGAATCTTCAATCCTATGAATTAGGCTATTCAT
ATGTGTAATGAAAGGATTCTTCCTCTTTCAAATACTATACAAACATTCTGATATTCTCTTTTAAAAGAAACAAGGCCATAAAC
AAGTTGCCCTGCCTTAACAATCCATGGAAAAAATCATCAACAAAATTTGGTCTTGTGTGTTCAGCAGCACCAGATAACAAGCTTTCTGACCTTGT
GGCTGATAGTGTTAAAGGGGCAGAGGAAACGTGCAATGAGAACCCGGCTAGCGGAGAATGCGCGGCGGCTTGGGATGTTGTGGAAGAGGCAAGTG
CAGCGGCTAGTCATGCAAGGGACAAGAAGAAGCAGGAAGATGTTTTGGAAAATTATTGCAAGGAAAATCCAGAGACTGATGAGTGCCGTACATAT
GATAATTGATAGTGTACTAGTTTTGTGTTATTTAAGCACTCCGCTCTATTTTATTCCCAATTTGAATCTTCAATCCTATGAATTAGGCTATTCAT
ATGTGTAATGAAAGGATTCTTCCTCTTTCAAATACTATACAAACATTCTGATATTCTCTTTTAAAAGAAACAAGGCCATAAAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290439] | SGN-U579791 | Tomato 200607 | Build 2 | 39 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102118 [Download][View] | Facility Assigned ID: TPSDB13TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0025 | Quality Trim Threshold: 12.5 |
Working
