EST details — SGN-E290400
| Search information |
| Request: 290400 | Match: SGN-E290400 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C77141 | Clone name: cLES-20-B15 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179237 is on microarray TOM1: SGN-S1-1-6.4.2.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179237 [TUS-31-D19] | Trace: SGN-T185459 | EST: SGN-E373321 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290400 | Length: 240 bp (996 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E290400 [] (trimmed)
GAAGCCTGAACAAGCTAAAATCATTTATATCATCACCAATCACCTGTTAGGACTTGTAAATACTGCTGCGTTTGCATCATAAACACAATTAGATC
CGTAAATTTTAAAGCAGATATCTTTGATAAAATATCTTGTCGATATCACTTGACATGAATGCACAATGTGCTTATGAGATTCCTTTAGTCTATGA
TCAGCTCTACAAGAAGTGAAACTGAGGCATTCCTGATCATCGACTTTAAA
CGTAAATTTTAAAGCAGATATCTTTGATAAAATATCTTGTCGATATCACTTGACATGAATGCACAATGTGCTTATGAGATTCCTTTAGTCTATGA
TCAGCTCTACAAGAAGTGAAACTGAGGCATTCCTGATCATCGACTTTAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290400] | SGN-U579053 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T102079 [Download][View] | Facility Assigned ID: TPSDA08TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.923 | Expected Error Rate: 0.0269 | Quality Trim Threshold: 14.5 |
Working
