EST details — SGN-E290052
| Search information |
| Request: 290052 | Match: SGN-E290052 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C87557 | Clone name: cLET-5-C14 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C181961 is on microarray TOM1: SGN-S1-1-2.2.10.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181961 [TUS-38-F7] | Trace: SGN-T194695 | EST: SGN-E393369 | Direction: 3' | Facility: INRA |
| Clone: SGN-C181961 [TUS-38-F7] | Trace: SGN-T199325 | EST: SGN-E397999 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E290052 | Length: 565 bp (906 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E290052 [] (trimmed)
AAAAGTTAGAAGTTGTGATCATTCTCTCTCACTAATACAGAAATGGCAACCATCACTGCTTGCACCACAACTTCTTCGGTGGCGCGTGCCGCCCT
CGTGCAAAGGGGATCTGTATCTCGCACCTCAGTTGTTCTTGGATTACCATCAATGAGCAAGGGTGGAAAAGTGAAATGTTCAATGGAAGGAAAGG
GAAAGGGTGAATCAAAGTTGGGAATGGGAGAATCATTGATGGCAGCAGCAGTAGCAGCAAGCATGTCAAGCCCAGTAGCAATGGCTTTGGTTGAT
GAAAGAATGAGCACTGAAGGAACAGGGCTACCATTTGGACTCAGCAACAATCTTCTTGGTTGGATCCTTTTAGGTGTATTAGGTTTGATTTGGTC
TCTCTACACTGTTTACACTTCTGGACTTGATGAAGATGAACAATCTGGAATGTCTCTTTAATTATTGTCTATTATTTTATTTTTGGCATACTATA
ATCAAACTTTAATGAATCTAACTACTTCTTTTGATGTTGTATCTCTTACACTCTTCAATTGAAGTATTGTATTTTTCCTTCTCCTCTTTC
CGTGCAAAGGGGATCTGTATCTCGCACCTCAGTTGTTCTTGGATTACCATCAATGAGCAAGGGTGGAAAAGTGAAATGTTCAATGGAAGGAAAGG
GAAAGGGTGAATCAAAGTTGGGAATGGGAGAATCATTGATGGCAGCAGCAGTAGCAGCAAGCATGTCAAGCCCAGTAGCAATGGCTTTGGTTGAT
GAAAGAATGAGCACTGAAGGAACAGGGCTACCATTTGGACTCAGCAACAATCTTCTTGGTTGGATCCTTTTAGGTGTATTAGGTTTGATTTGGTC
TCTCTACACTGTTTACACTTCTGGACTTGATGAAGATGAACAATCTGGAATGTCTCTTTAATTATTGTCTATTATTTTATTTTTGGCATACTATA
ATCAAACTTTAATGAATCTAACTACTTCTTTTGATGTTGTATCTCTTACACTCTTCAATTGAAGTATTGTATTTTTCCTTCTCCTCTTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E290052] | SGN-U578420 | Tomato 200607 | Build 2 | 151 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T103500 [Download][View] | Facility Assigned ID: TMEAR19TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 12.5 |
Working
