EST details — SGN-E289542

Search information 
Request: 289542Match: SGN-E289542
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C85697Clone name: cLET-3-P1
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C190652 [TUS-60-P10] Trace: SGN-T341475 EST: SGN-E540600 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C190652 [TUS-60-P10] Trace: SGN-T349287 EST: SGN-E548412 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E289542Length: 420 bp (782 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E289542 [] (trimmed) GCCAATTGAGCCATTGTTAACACTTTTTGGGTTCTTGTTTTTTGTTCTTGGCTTATACTTATTTATCTTCTTGTTAGATTATAGAACTGTGGATA
CTACTGGTTCTCACTTGCGTGGGCCTTCTTTTTTTGTTACCTGGTTTGGTCTTAATGATTCTTCTTTAGTACTAAAAAATAGTAGTAGTAGAAGT
AGAAATGATGATAAAGTGGGGTTTCTTGAAAATGATTGTGATATATTTGATGGGAATTGGGTGTGGGATGAGAGTTATCCACTTTATCAATCAGA
AGATTGTATGTTTTTGGATGAAGGTTTTCGTTGTTCTAAGAATGGTAGACCTGATAATTTCTATACCAAATGGCGTTGGCAGCCTAAAGATTGCA
ACTTGCCCAGATTTGATGCAAAACATATGCTAGAAAAGCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E289542] SGN-U600320 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T103213 [Download][View] Facility Assigned ID: TMEAK85TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.934 Expected Error Rate: 0.0212 Quality Trim Threshold: 14.5