EST details — SGN-E289437
| Search information |
| Request: 289437 | Match: SGN-E289437 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C85626 | Clone name: cLET-3-J19 |
| ||
| Library Name: cLET | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4-6 weeks
Microarray: Alias clone SGN-C183439 is on microarray TOM1: SGN-S1-1-4.3.1.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183439 [TUS-42-C21] | Trace: SGN-T194919 | EST: SGN-E393593 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183439 [TUS-42-C21] | Trace: SGN-T195943 | EST: SGN-E394617 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183439 [TUS-42-C21] | Trace: SGN-T195943 | EST: SGN-E399135 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183439 [TUS-42-C21] | Trace: SGN-T200234 | EST: SGN-E399134 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289437 | Length: 440 bp (792 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289437 [] (trimmed)
CGCATAAAATATGAGAGTATTATTAAGTTGAAAATTTGAAACGAAACGAGATGAAACAGAAGTACAGACACAAGAGAGTGAGGATTAAGGCCCAC
GCCACAGCACGCCAACACAAATAGCGTGACAATTTATTGTAGCTTCAAAATAGAACTTAGTCCACCATCAACAGCTAAATTTTGACCACTTGTAT
AAGCAGATTCATCAGACGCCAAAAAAAGTGCTGATTGTGCTACATGCATCGTGCTCAACTTAACTCCTTTCAAGCTATAATATCTGGTACGCAGG
AACAGAAGCGTGCTGCTGAGAACTTAATTCAGGCATTCATAATGGCGACATGAGCAATAAAGACACATCTCCTTTCTGAAGGTGCGACCTTGACT
AAATATCGAGGTTCCTTCTTCCGAAGTTCCTCTCTAGAATATGGTAGGTTCTCGTGCTGG
GCCACAGCACGCCAACACAAATAGCGTGACAATTTATTGTAGCTTCAAAATAGAACTTAGTCCACCATCAACAGCTAAATTTTGACCACTTGTAT
AAGCAGATTCATCAGACGCCAAAAAAAGTGCTGATTGTGCTACATGCATCGTGCTCAACTTAACTCCTTTCAAGCTATAATATCTGGTACGCAGG
AACAGAAGCGTGCTGCTGAGAACTTAATTCAGGCATTCATAATGGCGACATGAGCAATAAAGACACATCTCCTTTCTGAAGGTGCGACCTTGACT
AAATATCGAGGTTCCTTCTTCCGAAGTTCCTCTCTAGAATATGGTAGGTTCTCGTGCTGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289437] | SGN-U571543 | Tomato 200607 | Build 2 | 63 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T103108 [Download][View] | Facility Assigned ID: TMEAK58TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 0 |
Working
