EST details — SGN-E289246
| Search information |
| Request: 289246 | Match: SGN-E289246 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C76465 | Clone name: cLES-18-C10 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185237 is on microarray TOM1: SGN-S1-1-6.2.11.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185237 [TUS-46-N19] | Trace: SGN-T1882 | EST: SGN-E378476 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C185237 [TUS-46-N19] | Trace: SGN-T199062 | EST: SGN-E397736 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185237 [TUS-46-N19] | Trace: SGN-T199063 | EST: SGN-E397737 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289246 | Length: 234 bp (320 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289246 [] (trimmed)
ACATTGTACATTGTTTCGGGTTATTAAAGCCACTTATGGAAGCTTGAAACACTACTTGCTAAATCCATATCAGAACAGAAATCTGCTTTCCAACT
AGTCAAGCTTCCTCTCATGTTCGCTTAGCATATTGAGATCTTCTCTGTAGTGAATCGTCTTCTGTGATTAAAAAAAATGTAGCACCCCGCGAAGA
ATTAAAAACGAAGAAGAGTTGGTCCTTCCCCCCAGCTCATGTAA
AGTCAAGCTTCCTCTCATGTTCGCTTAGCATATTGAGATCTTCTCTGTAGTGAATCGTCTTCTGTGATTAAAAAAAATGTAGCACCCCGCGAAGA
ATTAAAAACGAAGAAGAGTTGGTCCTTCCCCCCAGCTCATGTAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289246] | SGN-U579403 | Tomato 200607 | Build 2 | 96 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101688 [Download][View] | Facility Assigned ID: TPSCR17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.942 | Expected Error Rate: 0.0002 | Quality Trim Threshold: 14.5 |
Working
