EST details — SGN-E289055
| Search information |
| Request: 289055 | Match: SGN-E289055 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C76553 | Clone name: cLES-18-G15 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179166 is on microarray TOM1: SGN-S1-1-5.1.2.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179166 [TUS-31-A20] | Trace: SGN-T185265 | EST: SGN-E373823 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179166 [TUS-31-A20] | Trace: SGN-T185266 | EST: SGN-E373824 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E289055 | Length: 554 bp (857 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E289055 [] (trimmed)
GTCGTTGGAAACAAAATCACCTGAACAGAGTGGTACGAAGAGGCGACCTGGTCGTTCTGCTAAGACTGGCACAGTAAATGCTTCTTCTCCTGCAT
CTGCTGCGGCTTCCTCCAAACCCAGAGGGCGGCCAAAGAAAGGTTCTACTCCTGGACGAAGAGGCCGACCTAGGAAGAACGTGTCTGTTAGTGTT
AATGCCGATGCAGCCAACATTCCTTCTGGTAATCCCAATATTCCTGTTGGTGGTAGTGACCTTACTGCTCAAACACCAACCCCTAAACGACGGGG
AAGGCCAGCAAAATCTAACAATCAAGGTGGACCCGCTGCTGCATCTGTCGGTGTCACTGATGTGCCTATTGCTGCTGCTTTTGATTCCGAGGGCT
TCCCTAACACTGTTAGTGGTGTCACAAATGGGGCTACTACGCCCCTTGGAAAGCGACGCGGACGTCCTCCAAAAGCATACAGTAGTCCAGCGGTT
ACTTCTACTGTTAAGAGAGCCAGGAAGCTTTCGGGGAAGCCTCTATGTCGACCGAAAAAGAATGTGACATCCCCTGCAG
CTGCTGCGGCTTCCTCCAAACCCAGAGGGCGGCCAAAGAAAGGTTCTACTCCTGGACGAAGAGGCCGACCTAGGAAGAACGTGTCTGTTAGTGTT
AATGCCGATGCAGCCAACATTCCTTCTGGTAATCCCAATATTCCTGTTGGTGGTAGTGACCTTACTGCTCAAACACCAACCCCTAAACGACGGGG
AAGGCCAGCAAAATCTAACAATCAAGGTGGACCCGCTGCTGCATCTGTCGGTGTCACTGATGTGCCTATTGCTGCTGCTTTTGATTCCGAGGGCT
TCCCTAACACTGTTAGTGGTGTCACAAATGGGGCTACTACGCCCCTTGGAAAGCGACGCGGACGTCCTCCAAAAGCATACAGTAGTCCAGCGGTT
ACTTCTACTGTTAAGAGAGCCAGGAAGCTTTCGGGGAAGCCTCTATGTCGACCGAAAAAGAATGTGACATCCCCTGCAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E289055] | SGN-U579598 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101497 [Download][View] | Facility Assigned ID: TPSCQ44TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0097 | Quality Trim Threshold: 14.5 |
Working
