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EST details — SGN-E288941

Search information 
Request: 288941Match: SGN-E288941
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C76249Clone name: cLES-17-G4
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185556 is on microarray TOM1: SGN-S1-1-7.4.10.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185556 [TUS-47-L2] Trace: SGN-T192679 EST: SGN-E391353 Direction: 3' Facility: INRA
Clone: SGN-C185556 [TUS-47-L2] Trace: SGN-T197692 EST: SGN-E396366 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E288941Length: 550 bp (883 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E288941 [] (trimmed) GTCCACGTAATTAAGCTTCTTCAAATCCTCCATCTCCGACGTTGTTCTTTCTCACCGGAATCCACGATGGTGGCTGCAAAGAAGACCAAGAAGAC
TCATGAGAGTATCAACAACAGGCTCGCTCTTGTTATGAAGAGCGGGAAGTATACATTGGGATACAAAACTGTTCTCAAAACAATTAGAAGTTCCA
AAGCAAAACTTGTCATCATTGCCAACAACTGTCCTCCTATCAGGAAGTCTGAGATAGAGTACTATGCTATGTTGGCAAAGGTTGGAGTTCACCAC
TACAACGGAAACAACGTAGACTTGGGGACTGCCTGTGGTAAATACTTCAGAGTTTGTTGCCTCAGTATTATTGACCCAGGTGATTCTGATATTAT
TAAAAGCTTGCCTTCTGACCAGTGAAAGAGGCATTTGATTTGATGCTGTTTTGGATCCTATTCAGAAGTTGCCCGATTGTTATTAAGAAAAAGTA
GCTACAATTGATGAGTTTGACAACTTCATTTATCACTTGTTGCAAGAAAGTTTTGATGTTGAATCTGATTTTAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E288941] SGN-U578401 Tomato 200607 Build 2 53 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T101383 [Download][View] Facility Assigned ID: TPSCN38TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0098 Quality Trim Threshold: 12.5