EST details — SGN-E288941
Search information |
Request: 288941 | Match: SGN-E288941 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C76249 | Clone name: cLES-17-G4 |
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Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185556 is on microarray TOM1: SGN-S1-1-7.4.10.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C185556 [TUS-47-L2] | Trace: SGN-T192679 | EST: SGN-E391353 | Direction: 3' | Facility: INRA |
Clone: SGN-C185556 [TUS-47-L2] | Trace: SGN-T197692 | EST: SGN-E396366 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E288941 | Length: 550 bp (883 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E288941 [] (trimmed)
GTCCACGTAATTAAGCTTCTTCAAATCCTCCATCTCCGACGTTGTTCTTTCTCACCGGAATCCACGATGGTGGCTGCAAAGAAGACCAAGAAGAC
TCATGAGAGTATCAACAACAGGCTCGCTCTTGTTATGAAGAGCGGGAAGTATACATTGGGATACAAAACTGTTCTCAAAACAATTAGAAGTTCCA
AAGCAAAACTTGTCATCATTGCCAACAACTGTCCTCCTATCAGGAAGTCTGAGATAGAGTACTATGCTATGTTGGCAAAGGTTGGAGTTCACCAC
TACAACGGAAACAACGTAGACTTGGGGACTGCCTGTGGTAAATACTTCAGAGTTTGTTGCCTCAGTATTATTGACCCAGGTGATTCTGATATTAT
TAAAAGCTTGCCTTCTGACCAGTGAAAGAGGCATTTGATTTGATGCTGTTTTGGATCCTATTCAGAAGTTGCCCGATTGTTATTAAGAAAAAGTA
GCTACAATTGATGAGTTTGACAACTTCATTTATCACTTGTTGCAAGAAAGTTTTGATGTTGAATCTGATTTTAAC
TCATGAGAGTATCAACAACAGGCTCGCTCTTGTTATGAAGAGCGGGAAGTATACATTGGGATACAAAACTGTTCTCAAAACAATTAGAAGTTCCA
AAGCAAAACTTGTCATCATTGCCAACAACTGTCCTCCTATCAGGAAGTCTGAGATAGAGTACTATGCTATGTTGGCAAAGGTTGGAGTTCACCAC
TACAACGGAAACAACGTAGACTTGGGGACTGCCTGTGGTAAATACTTCAGAGTTTGTTGCCTCAGTATTATTGACCCAGGTGATTCTGATATTAT
TAAAAGCTTGCCTTCTGACCAGTGAAAGAGGCATTTGATTTGATGCTGTTTTGGATCCTATTCAGAAGTTGCCCGATTGTTATTAAGAAAAAGTA
GCTACAATTGATGAGTTTGACAACTTCATTTATCACTTGTTGCAAGAAAGTTTTGATGTTGAATCTGATTTTAAC
Unigenes |
Current Unigene builds | |||||
[SGN-E288941] | SGN-U578401 | Tomato 200607 | Build 2 | 53 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T101383 [Download][View] | Facility Assigned ID: TPSCN38TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0098 | Quality Trim Threshold: 12.5 |