EST details — SGN-E288718
| Search information |
| Request: 288718 | Match: SGN-E288718 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C79363 | Clone name: cLES-8-L1 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C190301 [TUS-60-A19] | Trace: SGN-T340872 | EST: SGN-E539997 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C190301 [TUS-60-A19] | Trace: SGN-T340875 | EST: SGN-E540000 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E288718 | Length: 536 bp (874 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E288718 [] (trimmed)
AAAGACTTGAAGCTCTTAGGCCAATTAGAGAAGTTGAAGTTACTGCCATGATTGAAAACATTTTCAAGGACACAACTAAGCCTGGTGATGATAGT
AAAACGATGACGCTGAGGGGATACTTGGGATTAGTATCATTCAACAACATAACAAGGCTAACATTTGGGAAGAGATTTATAAACTCAAAAGGTGA
AGTTGATGAACAAGGTGAAGAGCTTAAATCCATTGTAACAGATGGGATAAGAATATCAGGAAAACCTAATTTGGGTGAATTTGTACCATGGTTAC
GTTGGGTATTTAAAGATGACAATGAAGCTCTTGAGTCACAAGATAGACGTTTGAATAAATTTACAAGACTTATAATGGAAGAACACACAATTGCT
AGAGAAAAATCTGGAGAAACCAAACATCATTTTGTTGATGCTTTACTTACCCTTCAAAAGGAATATGATCTTAGTGATGACTCTATTATTAGCCT
CTTTTGGGATATGGTACAAGCAGGGACAGATACAATAGCTATAACAGTTGAATGGGCTATG
AAAACGATGACGCTGAGGGGATACTTGGGATTAGTATCATTCAACAACATAACAAGGCTAACATTTGGGAAGAGATTTATAAACTCAAAAGGTGA
AGTTGATGAACAAGGTGAAGAGCTTAAATCCATTGTAACAGATGGGATAAGAATATCAGGAAAACCTAATTTGGGTGAATTTGTACCATGGTTAC
GTTGGGTATTTAAAGATGACAATGAAGCTCTTGAGTCACAAGATAGACGTTTGAATAAATTTACAAGACTTATAATGGAAGAACACACAATTGCT
AGAGAAAAATCTGGAGAAACCAAACATCATTTTGTTGATGCTTTACTTACCCTTCAAAAGGAATATGATCTTAGTGATGACTCTATTATTAGCCT
CTTTTGGGATATGGTACAAGCAGGGACAGATACAATAGCTATAACAGTTGAATGGGCTATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E288718] | SGN-U576403 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T99238 [Download][View] | Facility Assigned ID: TPSBE61TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0056 | Quality Trim Threshold: 14.5 |
Working
