EST details — SGN-E288222
| Search information |
| Request: 288222 | Match: SGN-E288222 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C79152 | Clone name: cLES-7-P18 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185492 is on microarray TOM1: SGN-S1-1-7.1.9.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185492 [TUS-47-I10] | Trace: SGN-T191952 | EST: SGN-E390626 | Direction: 3' | Facility: INRA |
| Clone: SGN-C185492 [TUS-47-I10] | Trace: SGN-T191953 | EST: SGN-E390627 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E288222 | Length: 577 bp (833 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E288222 [] (trimmed)
GTGAAGCTTTACTCAATCGGCAAGTTATTCAGAAATCTTTTGGTATCAGAAATGGCAACTCTTGCTCTAAGGAGGGCCACCGCCTCATCACTATT
CAACAGGCTCGTCAATCCTGTTCGTTCTGCATCTGCTTTCCGTTCATTCAATACTAACACTCAGATGACAGCTTATGACCAGGATGATCGTGGCG
TTGATGTTGACCGCCGGTCCGATCGATCCGTCTCTCGCCGTGATGCTTTTCCTAGTTTATTCTCAGATGTATTTGATCCATTTTCACCACCAATT
AGGAGCGTGAGCCAATTGCTGAACATGATGGATCAAATGATGGATTCTCCATTCGTAGCTGCACCGCGTGCAATGGGCGCCGGAGTTGGAGCAAG
AAGAGGATGGGATGTAAAGGAGGACGATAACGCTCTGTATATAAAAATGGACATGCCTGGACTCGATAAGGAGAATGTGAAGGTGGCGGTGGAGG
AGAACACGCTGATAATCAAAGGAGAAGGCGAGAAAGAGTCGGAGAATGAAGAGTATAGAAAGAGGTACTCTACCAGACTGGAAATTCCTCAAAAT
ATCTACA
CAACAGGCTCGTCAATCCTGTTCGTTCTGCATCTGCTTTCCGTTCATTCAATACTAACACTCAGATGACAGCTTATGACCAGGATGATCGTGGCG
TTGATGTTGACCGCCGGTCCGATCGATCCGTCTCTCGCCGTGATGCTTTTCCTAGTTTATTCTCAGATGTATTTGATCCATTTTCACCACCAATT
AGGAGCGTGAGCCAATTGCTGAACATGATGGATCAAATGATGGATTCTCCATTCGTAGCTGCACCGCGTGCAATGGGCGCCGGAGTTGGAGCAAG
AAGAGGATGGGATGTAAAGGAGGACGATAACGCTCTGTATATAAAAATGGACATGCCTGGACTCGATAAGGAGAATGTGAAGGTGGCGGTGGAGG
AGAACACGCTGATAATCAAAGGAGAAGGCGAGAAAGAGTCGGAGAATGAAGAGTATAGAAAGAGGTACTCTACCAGACTGGAAATTCCTCAAAAT
ATCTACA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E288222] | SGN-U578546 | Tomato 200607 | Build 2 | 85 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98978 [Download][View] | Facility Assigned ID: TPSBB93THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.989 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |
Working
