EST details — SGN-E287977
| Search information |
| Request: 287977 | Match: SGN-E287977 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78985 | Clone name: cLES-7-G4 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184280 is on microarray TOM1: SGN-S1-1-3.2.16.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184280 [TUS-44-F22] | Trace: SGN-T198386 | EST: SGN-E397060 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184280 [TUS-44-F22] | Trace: SGN-T198387 | EST: SGN-E397061 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287977 | Length: 588 bp (844 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287977 [] (trimmed)
GACAACTGCTTTTCCATTATTGAATTCCCTCTAAATTTCCCTTAGCTCATATAATACGCCATCTCCCATCATTAGTGTGCAAATTTGATTCCACA
ACACAGAGAAAAAATCCAAGAGAGAGAAGAGGGTATTTACGCCTACATCTCTAGCTATAGGCTATATAGGTGAAATTTGTGAGGATTTTGGGGAG
CTTTTAACATGGCGGATGGCCAACTACCACCATATCTTATGAGGTACGAGCAGCTAAGCTTTTGTTGAATAAACAAAAAGGACCAATAGAAATAT
TTATACTATCCAGCAGGTTATTATTATTATTATTGATTGTGTCGGTGCTTTCAACATATTTCCTTTTCTTTTGAGGAGTCTTTTATTAGAAATAA
TAATTATAATTGTAAAAAAAAAAAATGCTTTTAAGAAAATCAACGTAGAGTAGCCACAACCGCTACCACAATAACCTTTTTCTTCATTCACTTCC
AGCTTTTGCCTTTTCATGGGTATTCTTTCTCTCTCTCCCAGTTTAGCTCTAGATTACAGGGAAACAAAATTTTTGTAATTCAGTCCCTGTAATTT
CACATAATAATTATTATA
ACACAGAGAAAAAATCCAAGAGAGAGAAGAGGGTATTTACGCCTACATCTCTAGCTATAGGCTATATAGGTGAAATTTGTGAGGATTTTGGGGAG
CTTTTAACATGGCGGATGGCCAACTACCACCATATCTTATGAGGTACGAGCAGCTAAGCTTTTGTTGAATAAACAAAAAGGACCAATAGAAATAT
TTATACTATCCAGCAGGTTATTATTATTATTATTGATTGTGTCGGTGCTTTCAACATATTTCCTTTTCTTTTGAGGAGTCTTTTATTAGAAATAA
TAATTATAATTGTAAAAAAAAAAAATGCTTTTAAGAAAATCAACGTAGAGTAGCCACAACCGCTACCACAATAACCTTTTTCTTCATTCACTTCC
AGCTTTTGCCTTTTCATGGGTATTCTTTCTCTCTCTCCCAGTTTAGCTCTAGATTACAGGGAAACAAAATTTTTGTAATTCAGTCCCTGTAATTT
CACATAATAATTATTATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287977] | SGN-U580406 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98733 [Download][View] | Facility Assigned ID: TPSAZ38TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0034 | Quality Trim Threshold: 14.5 |
Working
