EST details — SGN-E287820
| Search information |
| Request: 287820 | Match: SGN-E287820 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C76849 | Clone name: cLES-19-J11 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185576 is on microarray TOM1: SGN-S1-1-3.4.9.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185576 [TUS-47-L22] | Trace: SGN-T197693 | EST: SGN-E396367 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185576 [TUS-47-L22] | Trace: SGN-T197780 | EST: SGN-E396454 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287820 | Length: 518 bp (737 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287820 [] (trimmed)
CGCCGCTAGTGTCCTCAAGTGTGGAAGAGGCAAAGTTTGGCTTGATCCTAATGAAGGCAATGAAATCTCCATGGCCAATTCCCGTCAAAACATCA
GGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGC
CGTCACTCTGGATATGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTT
GCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTG
TGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCA
AGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTC
GGAAATTGGTTAAGGATGGTTTCATCATCAGGAAACCAACCAAAATTCACTCGAGATCTCGTGCTCGCCGAATGAAGGAGGCCAAGAGGAAAGGC
CGTCACTCTGGATATGGTAAGCGCAAAGGTACCAGGGAGGCTAGACTGCCTACCAAGGTGCTTTGGATGAGGAGATTGAGAGTCCTCAGGCGTTT
GCTTCGCAAGTATAGGGAATCAAAGAAGATTGACAAACACATGTATCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTG
TGCTGATGGAAAATATCCACAAGACAAAGGCTGAGAAGGCTAGAGAGAAAACCTTGTCCGACCAATTTGAGGCTAGGAGGGCAAAGAACAAGGCA
AGCAGAGAAAGAAAGTTTGCAAGGAGAGAAGAACGTTTGGCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287820] | SGN-U578709 | Tomato 200607 | Build 2 | 92 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T101877 [Download][View] | Facility Assigned ID: TPSCW54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 14.5 |
Working
