EST details — SGN-E287408
| Search information |
| Request: 287408 | Match: SGN-E287408 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C75878 | Clone name: cLES-15-O2 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185541 is on microarray TOM1: SGN-S1-1-6.3.9.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185541 [TUS-47-K11] | Trace: SGN-T192083 | EST: SGN-E390757 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185541 [TUS-47-K11] | Trace: SGN-T192594 | EST: SGN-E391268 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287408 | Length: 525 bp (912 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287408 [] (trimmed)
TAATTTCTCTCTCTTACATCTTTGCTTAAGCTTTCATACTCTTTTTTTTCTTAGCAATGGCAAACGGAAAGATCAAAATCGGAATCAACGGATTC
TGTAGAATTGGTCGTTTGGTGGCTAGAGTTGCTCTACAGAGAGATGATGTTGAACTAGTTGCAGCGAATGATCCATTTATTTCCACTGATTACAT
GACATATATGTTTAAGTATGATTCAGTACATGGACAATGGAAGCATCATGAGCTAAAGGTCAAGGATGAGAAGACACTTCTCTTTGGAGAGAAGG
CTGTTACAGTTTTTGGAATCAGGAACCCTGAAGATATCCCATGGGGTGAAGCTGGTGCTGACTTCGTTGTTGAATCAACCGGTGTCTTCACTGAC
AAGGACAAGGCTGCTGCTCACTTGAAGGGTGGTGCCAAGAAGGTTGTGATCTCTGCTCCTAGCAAAGATGCTCCCATGTTTGTTGTGGGTGTCAA
CGAGAATGAATACAAGCCAGAGCTGGACATTGTCTCCAATGCTAGTTGCA
TGTAGAATTGGTCGTTTGGTGGCTAGAGTTGCTCTACAGAGAGATGATGTTGAACTAGTTGCAGCGAATGATCCATTTATTTCCACTGATTACAT
GACATATATGTTTAAGTATGATTCAGTACATGGACAATGGAAGCATCATGAGCTAAAGGTCAAGGATGAGAAGACACTTCTCTTTGGAGAGAAGG
CTGTTACAGTTTTTGGAATCAGGAACCCTGAAGATATCCCATGGGGTGAAGCTGGTGCTGACTTCGTTGTTGAATCAACCGGTGTCTTCACTGAC
AAGGACAAGGCTGCTGCTCACTTGAAGGGTGGTGCCAAGAAGGTTGTGATCTCTGCTCCTAGCAAAGATGCTCCCATGTTTGTTGTGGGTGTCAA
CGAGAATGAATACAAGCCAGAGCTGGACATTGTCTCCAATGCTAGTTGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287408] | SGN-U580213 | Tomato 200607 | Build 2 | 353 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100913 [Download][View] | Facility Assigned ID: TPSCF85TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0102 | Quality Trim Threshold: 14.5 |
Working
