EST details — SGN-E287320
| Search information |
| Request: 287320 | Match: SGN-E287320 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C75752 | Clone name: cLES-15-F11 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185540 is on microarray TOM1: SGN-S1-1-7.3.9.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185540 [TUS-47-K10] | Trace: SGN-T191962 | EST: SGN-E390636 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185540 [TUS-47-K10] | Trace: SGN-T192198 | EST: SGN-E390872 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287320 | Length: 497 bp (879 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287320 [] (trimmed)
TTTTTCTCTCTTGTTGTTAACTGTCTCGGCTGAACAATGTGGTAGACAGGCAGGAGGTGCCCGTTGTGCCGCGGGACTGTGTTGCAGCAATTTTG
GGTGGTGTGGTAATACCAATGACTATTGTGGTCCTGGAAAGTGTCAAAGCCAGTGTCCATCTGGTCCTTCTCCGAAACCTCCTACCCCTGGCCCT
GGTCCTTCTGGTGGAGACATAAGCAGCGTCATCTCAAATTCCATGTTCGATCAGATGCTTAAGCATCGTAACGAAAATTCTTGTCAAGGAAAGAA
TAATTTCTACAGTTACAATGCCTTTATCAATGCTGCAAGGTCTTTTCGTGGCTTTGGCACTACGGGGGATAACACTGCACGAAAAAGGGAAATTG
CTGCTTTCTTTGCTCAAACCTCCCACGAAACTACTGGAGGATGGCCTTCAGCACCTGATGGACCCTACGCATGGGGTTACTGTTTCCTTAGAGAA
CAAGGTAGCCCAGGCGATTACT
GGTGGTGTGGTAATACCAATGACTATTGTGGTCCTGGAAAGTGTCAAAGCCAGTGTCCATCTGGTCCTTCTCCGAAACCTCCTACCCCTGGCCCT
GGTCCTTCTGGTGGAGACATAAGCAGCGTCATCTCAAATTCCATGTTCGATCAGATGCTTAAGCATCGTAACGAAAATTCTTGTCAAGGAAAGAA
TAATTTCTACAGTTACAATGCCTTTATCAATGCTGCAAGGTCTTTTCGTGGCTTTGGCACTACGGGGGATAACACTGCACGAAAAAGGGAAATTG
CTGCTTTCTTTGCTCAAACCTCCCACGAAACTACTGGAGGATGGCCTTCAGCACCTGATGGACCCTACGCATGGGGTTACTGTTTCCTTAGAGAA
CAAGGTAGCCCAGGCGATTACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287320] | SGN-U580366 | Tomato 200607 | Build 2 | 121 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100825 [Download][View] | Facility Assigned ID: TPSCG30TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.988 | Expected Error Rate: 0.0099 | Quality Trim Threshold: 14.5 |
Working
