EST details — SGN-E287287
| Search information |
| Request: 287287 | Match: SGN-E287287 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C75733 | Clone name: cLES-15-E10 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185539 is on microarray TOM1: SGN-S1-1-8.3.9.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185539 [TUS-47-K9] | Trace: SGN-T197626 | EST: SGN-E396300 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185539 [TUS-47-K9] | Trace: SGN-T197765 | EST: SGN-E396439 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287287 | Length: 610 bp (928 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287287 [] (trimmed)
AGCAGTCTTTTTTGCTCTCTTACTTCGCCCCCAGTTTTTCAGCTTTTCAAACAATCATCAATGGAGTTTTGGGGTGTTGAAGTGAAAGCAGGACA
AACACTAAAGGTTAAGCCCGAGCTTTTCAAGCTCATTCATATTTCTCAGGCTGCCATAGGTGAAGTGAAGGATGTCAAAGAAGCCAAATATGTTC
CACTACGCCTAACTGTTGGAGATAACAAATATGTCATTGGAACTCTATCTGCTGAGGATAGACCTCAGTTGATGTTTGACTTGGTCTTTGAAAAG
GAGTTTGAACTTTCACATGGATGGAAAAATGGGAGTGTGCACTTCATGGGATACTCTGCTGATGATCCGAGCAGTGAGGAAATTGACTCTGGAGA
TGATGTTTTTTTCCGATGAAGAGAATGTTATGGAGGCACTGAATGGGAAACTTGAGGCTGATGTGAAGGATGTAAAGCCTGATGCAAAGAAGTCT
GCACCTGCGAAGGATGAGAAAAATGCTAAGGTAGCTGAATCAAAGAAAGAGACGGAATCTGATGAAGATGATGACGATTCTGAAGATGACTCTGA
TGATGAAGACGATTCTGAAGATGACTCTGATGATGTGCCT
AACACTAAAGGTTAAGCCCGAGCTTTTCAAGCTCATTCATATTTCTCAGGCTGCCATAGGTGAAGTGAAGGATGTCAAAGAAGCCAAATATGTTC
CACTACGCCTAACTGTTGGAGATAACAAATATGTCATTGGAACTCTATCTGCTGAGGATAGACCTCAGTTGATGTTTGACTTGGTCTTTGAAAAG
GAGTTTGAACTTTCACATGGATGGAAAAATGGGAGTGTGCACTTCATGGGATACTCTGCTGATGATCCGAGCAGTGAGGAAATTGACTCTGGAGA
TGATGTTTTTTTCCGATGAAGAGAATGTTATGGAGGCACTGAATGGGAAACTTGAGGCTGATGTGAAGGATGTAAAGCCTGATGCAAAGAAGTCT
GCACCTGCGAAGGATGAGAAAAATGCTAAGGTAGCTGAATCAAAGAAAGAGACGGAATCTGATGAAGATGATGACGATTCTGAAGATGACTCTGA
TGATGAAGACGATTCTGAAGATGACTCTGATGATGTGCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287287] | SGN-U564113 | Tomato 200607 | Build 2 | 77 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100792 [Download][View] | Facility Assigned ID: TPSCF29TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0069 | Quality Trim Threshold: 14.5 |
Working
