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EST details — SGN-E287215

Search information 
Request: 287215Match: SGN-E287215
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C78733Clone name: cLES-6-J18
cartOrder Clone
Library Name: cLESOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185189 is on microarray TOM1: SGN-S1-1-6.4.11.2
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185189 [TUS-46-L19] Trace: SGN-T199055 EST: SGN-E397729 Direction: 5' Facility: INRA
Clone: SGN-C185189 [TUS-46-L19] Trace: SGN-T199110 EST: SGN-E397784 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E287215Length: 530 bp (848 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E287215 [] (trimmed) AAGGAGAAAGAAATAACAATATTGTTAAGCACTACTACTAGAGGAAATTGAAAAAATGCAAAGATGTAGCAGTACTTCATGAGTTAATTAGCAAC
CTAAAAACAAAAGTTCAAGCTACTTTTGCCAATTACAATAGAAGCTTCACTGCCCAAATGAATTTACCAATGTATATACACACAAAAATGCTTTT
ATATACACTATATAATTTTTCGACGAGACAGATAACTGCTTGTACCATTTTCATGTTTATCACCACACACCAACGTCCTGGCGCTCGCATAGTCC
AATCATATCAGCAGTTTTCATCAGCATATCTCGTCCAAATGATCTCGATATCCCTAATTTGATCAGATGATATGAACAATCTCTCAACATCCTGC
GATGAATTCGAAGTTTTGAGTACTGCTAAAGAATTATCCTTCAATACTTCATCATCTTCTGGTGCTAGCAAATAAATGCCAATAAACACAGAAAT
CATTCCAAAAACGAACATGGTTGTTCTTAAAGCATCAAACACCTTGTATTCCTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E287215] SGN-U583644 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T98667 [Download][View] Facility Assigned ID: TPSAX57TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.939 Expected Error Rate: 0.0022 Quality Trim Threshold: 12.5