EST details — SGN-E287199
| Search information |
| Request: 287199 | Match: SGN-E287199 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78605 | Clone name: cLES-6-D12 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179033 is on microarray TOM1: SGN-S1-1-2.4.3.18
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179033 [TUS-30-L7] | Trace: SGN-T184789 | EST: SGN-E372349 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179033 [TUS-30-L7] | Trace: SGN-T184790 | EST: SGN-E372350 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287199 | Length: 609 bp (839 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287199 [] (trimmed)
CCAAAATCACCAAATCCATTTCTAGAACCCTCTACACTTATCGTTTTTCTACTCGTTTCATCTCCTCCGCTTCATCGCCGTCGATTACTCAACCG
CCGTCACTTCCTGCCGTCGGATCTTCACCTCAGCCGTCATTTCTGCTCTCACACTCCCTTCTACCTACCAACCCTAATGGCCTCAAGCCGTTTAG
CCTCAATACGGTACGGTTCAGAGTTAACCGGTCCGGTAGCTCTCCTTACACTCCAGGAACCGGGGACCGAGCTCCGACTGAGATGGCACCACTGT
TTCCGGGATGCGATTACGAGCACTGGCTCATTGTTATGGATAAGCCTGGTGGAGAAGGAGCTCATAAACAGCAAATGATTGATTGTTATGTCCAA
ACCCTTGCTAAAGTCCTCGGGAGTGAAGAGGAAGCAAAAAAGAAGATTTACAATGTCTCTTGTGAGAGGTACTTTGGTTTCGGATGTGAAGTTGA
TGAAGAGACTGCTAATAAAATGGAAGGTTTGCCAGGTGTTCTGTTTGTGCTGCCTGATTCCTATGTTGATCCTGAATACAAGGATTATGGAGCTG
AACTTTTTGTCAACGGGGAGATAATTCAAAGATCACCTG
CCGTCACTTCCTGCCGTCGGATCTTCACCTCAGCCGTCATTTCTGCTCTCACACTCCCTTCTACCTACCAACCCTAATGGCCTCAAGCCGTTTAG
CCTCAATACGGTACGGTTCAGAGTTAACCGGTCCGGTAGCTCTCCTTACACTCCAGGAACCGGGGACCGAGCTCCGACTGAGATGGCACCACTGT
TTCCGGGATGCGATTACGAGCACTGGCTCATTGTTATGGATAAGCCTGGTGGAGAAGGAGCTCATAAACAGCAAATGATTGATTGTTATGTCCAA
ACCCTTGCTAAAGTCCTCGGGAGTGAAGAGGAAGCAAAAAAGAAGATTTACAATGTCTCTTGTGAGAGGTACTTTGGTTTCGGATGTGAAGTTGA
TGAAGAGACTGCTAATAAAATGGAAGGTTTGCCAGGTGTTCTGTTTGTGCTGCCTGATTCCTATGTTGATCCTGAATACAAGGATTATGGAGCTG
AACTTTTTGTCAACGGGGAGATAATTCAAAGATCACCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287199] | SGN-U569520 | Tomato 200607 | Build 2 | 33 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98651 [Download][View] | Facility Assigned ID: TPSAX18TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.988 | Expected Error Rate: 0.0086 | Quality Trim Threshold: 14.5 |
Working
