EST details — SGN-E287092
| Search information |
| Request: 287092 | Match: SGN-E287092 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78624 | Clone name: cLES-6-E13 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C179042 is on microarray TOM1: SGN-S1-1-1.4.2.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C179042 [TUS-30-L16] | Trace: SGN-T184879 | EST: SGN-E372087 | Direction: 3' | Facility: INRA |
| Clone: SGN-C179042 [TUS-30-L16] | Trace: SGN-T184880 | EST: SGN-E372088 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E287092 | Length: 674 bp (1133 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E287092 [] (trimmed)
CAAAATTCACATGGTTCACTTCTAACACCTGCTCCCCTTTTTTCTCAGATCTGTTCTTGGAGCTGCTAAAAGGTACATGGGTGGATAGAGGAAAT
TTGTGAAGGACTGATAGAAGTTACCGGAAAAAATGGCATTAGGAAAGTACTCTAGAGTAGATGGAAGGAAGTCATCAAACTATTGCTCCACTGTA
ACTATAGTGGTATTTGTAGCTCTATGTTTAGTTGGGGTATGGATGATGACGTCATCATCTGTCGTTCCAGACCAAAATCTAGATTTGTCCTCACA
GGGGAAAAAGACTGACCTGTCAACACAGGTAACCGAAGGTAAAGAGAGTTACAATGGTGGCAATGAGAGTAACAATAAAGCTGGTGATGAGAGTA
ATCCAACGGATGAGGGAAAATCAAAACAATTTGAGGATACCCTCGGTGATTTACCTGAGGATGCAACAAAAGGGGATGCGTTAGTTAGTCAAGAA
GAAAATGTTTCTAATCCACAACAGACAGAATCAACTTCAGAAGTGAAACAGGAAGAGAAATCGACAGAACAGAAAGAGGATGCTGGAGAATCTGA
GTCAGAAACTCAATCCGAGAAGGCAACAGATGGTTCAGATGACAAAAAGGAAGATGGTCCAAACAAAGTAGATGACAAGGATTCTGAGGCTGGGG
AGAAAACTG
TTGTGAAGGACTGATAGAAGTTACCGGAAAAAATGGCATTAGGAAAGTACTCTAGAGTAGATGGAAGGAAGTCATCAAACTATTGCTCCACTGTA
ACTATAGTGGTATTTGTAGCTCTATGTTTAGTTGGGGTATGGATGATGACGTCATCATCTGTCGTTCCAGACCAAAATCTAGATTTGTCCTCACA
GGGGAAAAAGACTGACCTGTCAACACAGGTAACCGAAGGTAAAGAGAGTTACAATGGTGGCAATGAGAGTAACAATAAAGCTGGTGATGAGAGTA
ATCCAACGGATGAGGGAAAATCAAAACAATTTGAGGATACCCTCGGTGATTTACCTGAGGATGCAACAAAAGGGGATGCGTTAGTTAGTCAAGAA
GAAAATGTTTCTAATCCACAACAGACAGAATCAACTTCAGAAGTGAAACAGGAAGAGAAATCGACAGAACAGAAAGAGGATGCTGGAGAATCTGA
GTCAGAAACTCAATCCGAGAAGGCAACAGATGGTTCAGATGACAAAAAGGAAGATGGTCCAAACAAAGTAGATGACAAGGATTCTGAGGCTGGGG
AGAAAACTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E287092] | SGN-U570255 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98544 [Download][View] | Facility Assigned ID: TPSAU31TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.942 | Expected Error Rate: 0.0079 | Quality Trim Threshold: 14.5 |
Working
