EST details — SGN-E286874
| Search information |
| Request: 286874 | Match: SGN-E286874 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C75507 | Clone name: cLES-14-F4 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185531 is on microarray TOM1: SGN-S1-1-8.3.10.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185531 [TUS-47-K1] | Trace: SGN-T192080 | EST: SGN-E390754 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185531 [TUS-47-K1] | Trace: SGN-T192592 | EST: SGN-E391266 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286874 | Length: 592 bp (810 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286874 [] (trimmed)
TTTACAGAAAGTACCAATTCAATTCATATTAATGACAAAACAGACATAAAAAAGACATCATTTCTTACTGGAAATAAAGGGAATTACAAGGAGGT
TACTCTATTTGAGACTAATATTCATGACATAAGAAAATTAACTCCACAAGATGCTGCGCAAATCATCAGTGCCATAATTGCCAAGAAATTGTATT
TCCCAAGAGTAAGCCGATTTTGGGGATCGCCAGTGGAATAACCAGTGAAGTAGAAATAGCGAGATACAATATAAACAGCTCCAAGAGATGCACAA
ATCAAGGGGTGCCTAATTCCTCCAACAATCATCAGCATGAAAAATGTTGGCATCATTTCTAATGAATTCTGATGACCTCTCTGAACACAGTTAAA
GGAATTAGCATTCTTGTTTTCAGCTTCAGTAGCATACATTGTTGGATAAGGAACCTTGTACTGTTTGCGGGCTTTGCCGACTTGAAAGGACATCC
AGAAGTTGAAGAAACAGTAGACGACAAGAGCAAGAATTACATATCCATATTCTTTGGGGAGGAATTCAACTCCGGCCATGGTTTTTTTCCGATTT
GGTGTTTTGCACTTTGGCGGAC
TACTCTATTTGAGACTAATATTCATGACATAAGAAAATTAACTCCACAAGATGCTGCGCAAATCATCAGTGCCATAATTGCCAAGAAATTGTATT
TCCCAAGAGTAAGCCGATTTTGGGGATCGCCAGTGGAATAACCAGTGAAGTAGAAATAGCGAGATACAATATAAACAGCTCCAAGAGATGCACAA
ATCAAGGGGTGCCTAATTCCTCCAACAATCATCAGCATGAAAAATGTTGGCATCATTTCTAATGAATTCTGATGACCTCTCTGAACACAGTTAAA
GGAATTAGCATTCTTGTTTTCAGCTTCAGTAGCATACATTGTTGGATAAGGAACCTTGTACTGTTTGCGGGCTTTGCCGACTTGAAAGGACATCC
AGAAGTTGAAGAAACAGTAGACGACAAGAGCAAGAATTACATATCCATATTCTTTGGGGAGGAATTCAACTCCGGCCATGGTTTTTTTCCGATTT
GGTGTTTTGCACTTTGGCGGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286874] | SGN-U580456 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100695 [Download][View] | Facility Assigned ID: TPSCD26TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0036 | Quality Trim Threshold: 14.5 |
Working
