EST details — SGN-E286515
| Search information |
| Request: 286515 | Match: SGN-E286515 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C74975 | Clone name: cLES-12-F1 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184330 is on microarray TOM1: SGN-S1-1-1.4.16.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184330 [TUS-44-H24] | Trace: SGN-T198403 | EST: SGN-E397077 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184330 [TUS-44-H24] | Trace: SGN-T198404 | EST: SGN-E397078 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E286515 | Length: 602 bp (859 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E286515 [] (trimmed)
CTAGTTGAGTGCTGAGAGACTAAAATTTGATTTTTGTTTCCCCTTAAACTGTTAGATCTCCATTCTATTTTCAACCTGTTCTCCGATCCGGGTTT
GTAATTCATCATTTTCCTGGATTGGTGAGACGAAATGGCTGCTCCACCTGCTAGAGCTCGTGCCGATTACGATCACCTCATCAAATTACTCTTGA
TCGGCGATAGCGGTGTAGGTAAAAGTTGCCTTCTTTTACGTTTCTCGGATGGATCCTTCACCACCAGTTTCATTACCACTATTGGCATTGATTTC
AAGATAAAGACTGTAGAACTTGACGGCAAGCGAATCAAACTGCAAATTTGGGATACTGCTGGTCAGGAGCGGTTCCGAACAATTACAACTGCTTA
CTACCGCGGAGCCATGGGTATCTTGCTGGTATATGATGTGACTGATGAGTCATCTTTTAACAACATCAGGAATTGGATCCGAAACATTGAACAAC
ATGCTTCTGACAATGTCAACAAAATACTTGTGGGAAACAAGGCTGATATGGATGAAAGCAAACGGGCTGTTCCTACATCCAAAGGTCAAGCACTA
GCTGATGAATATGGCATTAAATTCTTTGAGAC
GTAATTCATCATTTTCCTGGATTGGTGAGACGAAATGGCTGCTCCACCTGCTAGAGCTCGTGCCGATTACGATCACCTCATCAAATTACTCTTGA
TCGGCGATAGCGGTGTAGGTAAAAGTTGCCTTCTTTTACGTTTCTCGGATGGATCCTTCACCACCAGTTTCATTACCACTATTGGCATTGATTTC
AAGATAAAGACTGTAGAACTTGACGGCAAGCGAATCAAACTGCAAATTTGGGATACTGCTGGTCAGGAGCGGTTCCGAACAATTACAACTGCTTA
CTACCGCGGAGCCATGGGTATCTTGCTGGTATATGATGTGACTGATGAGTCATCTTTTAACAACATCAGGAATTGGATCCGAAACATTGAACAAC
ATGCTTCTGACAATGTCAACAAAATACTTGTGGGAAACAAGGCTGATATGGATGAAAGCAAACGGGCTGTTCCTACATCCAAAGGTCAAGCACTA
GCTGATGAATATGGCATTAAATTCTTTGAGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E286515] | SGN-U577627 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T100046 [Download][View] | Facility Assigned ID: TPSBU25TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 14.5 |
Working
