EST details — SGN-E285849
| Search information |
| Request: 285849 | Match: SGN-E285849 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78336 | Clone name: cLES-5-F24 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178953 is on microarray TOM1: SGN-S1-1-2.4.2.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178953 [TUS-30-H23] | Trace: SGN-T184689 | EST: SGN-E372249 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E285849 | Length: 598 bp (935 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285849 [] (trimmed)
TTCAAAATGAACTCACCATCAACAGCAACAAGAAGAAGAAGACCATGTTTCGTTGAAGAAGATGATGGTCTTGTTTCTATAGCTGAAACTCAACC
TGAGTTCTCAGGCAATAATAATCAAAATCATATTAATAATAATAATAATAACAATAACAAGAATCATAATTTGATTTATAGACCTCTTTATTATT
CAAGAAGAAATAGCATGAAGAATCACTCTTCTTCTTCTTCTTCTTCTTCTTATTCTTTGTTGTCTCCAAGATCTGTTATTTCTGCTGGAAAATAC
TGTGATGGTAGATTTGATGAACCCCATCACTATTTCTTGGATGCTTGTTCTCTTTGTAAGAAAAGACTTGGTGATAACAGTGACATCTTCATGTA
CAGAGGGGACACTCCATTCTGTAGTGAAGAGTGTAGACAACAAGAAATAGAGAAGGATGAAGCTCAAGATAGAAAAAGAAACATTTCTTCTTTAA
AAGCTATGAGAAAAAAGGAACAAAAACAACAATCAACATCTCCAAACAAAACTTCAGCAGAAGATTACCCTTTGAGACCTGGAACTGTTGCTGCT
GCTTGAGCAAAAAATGATAAATGAATCT
TGAGTTCTCAGGCAATAATAATCAAAATCATATTAATAATAATAATAATAACAATAACAAGAATCATAATTTGATTTATAGACCTCTTTATTATT
CAAGAAGAAATAGCATGAAGAATCACTCTTCTTCTTCTTCTTCTTCTTCTTATTCTTTGTTGTCTCCAAGATCTGTTATTTCTGCTGGAAAATAC
TGTGATGGTAGATTTGATGAACCCCATCACTATTTCTTGGATGCTTGTTCTCTTTGTAAGAAAAGACTTGGTGATAACAGTGACATCTTCATGTA
CAGAGGGGACACTCCATTCTGTAGTGAAGAGTGTAGACAACAAGAAATAGAGAAGGATGAAGCTCAAGATAGAAAAAGAAACATTTCTTCTTTAA
AAGCTATGAGAAAAAAGGAACAAAAACAACAATCAACATCTCCAAACAAAACTTCAGCAGAAGATTACCCTTTGAGACCTGGAACTGTTGCTGCT
GCTTGAGCAAAAAATGATAAATGAATCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E285849] | SGN-U576760 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98332 [Download][View] | Facility Assigned ID: TPSAT36TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.926 | Expected Error Rate: 0.0103 | Quality Trim Threshold: 14.5 |
Working
