EST details — SGN-E285841
| Search information |
| Request: 285841 | Match: SGN-E285841 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C78293 | Clone name: cLES-5-D20 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178944 is on microarray TOM1: SGN-S1-1-3.4.3.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178944 [TUS-30-H14] | Trace: SGN-T184943 | EST: SGN-E372151 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178944 [TUS-30-H14] | Trace: SGN-T184944 | EST: SGN-E372152 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E285841 | Length: 523 bp (906 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285841 [] (trimmed)
TTTTGTTTGTGATTCAGAAAAATGCCAAGGTTGTTAAAATAGATAGCTATGAAGATGTTCCTGTTAATAACGAAAAGGCGTTGCAAAAGGCTGTT
GCACATCAACCTGTGAGCATTGCACTTGAAGCTGGTGGCAGAGACTTCCAGCACTACAAACATGGAATGGTTCAATTCTCGAAAAGCCCTATCTT
TTTTTCAACACCGAATGTCTTTCCAGTGAAATGTTGCCTTCTGATCAATGACGTGTAGTTTTAATTTCCATCAAAGATATATTAGGTGACAGACT
TCTAACTGTAGGTCGAAAACTATGATATAACAATGATCATATCCAATTATTTACTCGTAATTGCAGGGTATCTTCACTGGAAAATGTGGTACTGC
AGAGGATCATGGTGTAGATATTGCTTGATATGGTACTGAGAATGGCATGGCTTATTGCATCGCTAGGAACTCATGGGGAGCTAACTGGGGAGAGA
ACGGCTACCTCAGAGTCCAGCGTAACGTCGCCAGCTCTAGTGGCTTGT
GCACATCAACCTGTGAGCATTGCACTTGAAGCTGGTGGCAGAGACTTCCAGCACTACAAACATGGAATGGTTCAATTCTCGAAAAGCCCTATCTT
TTTTTCAACACCGAATGTCTTTCCAGTGAAATGTTGCCTTCTGATCAATGACGTGTAGTTTTAATTTCCATCAAAGATATATTAGGTGACAGACT
TCTAACTGTAGGTCGAAAACTATGATATAACAATGATCATATCCAATTATTTACTCGTAATTGCAGGGTATCTTCACTGGAAAATGTGGTACTGC
AGAGGATCATGGTGTAGATATTGCTTGATATGGTACTGAGAATGGCATGGCTTATTGCATCGCTAGGAACTCATGGGGAGCTAACTGGGGAGAGA
ACGGCTACCTCAGAGTCCAGCGTAACGTCGCCAGCTCTAGTGGCTTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E285841] | SGN-U581189 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T98324 [Download][View] | Facility Assigned ID: TPSAT22TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0295 | Quality Trim Threshold: 14.5 |
Working
