EST details — SGN-E285493
| Search information |
| Request: 285493 | Match: SGN-E285493 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C74524 | Clone name: cLES-10-C21 |
| ||
| Library Name: cLES | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185511 is on microarray TOM1: SGN-S1-1-4.2.10.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185511 [TUS-47-J5] | Trace: SGN-T192345 | EST: SGN-E391019 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185511 [TUS-47-J5] | Trace: SGN-T192619 | EST: SGN-E391293 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E285493 | Length: 264 bp (838 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285493 [] (trimmed)
CAAAAATCAGAGAAAATTACCCAAATTCAGAAACTGAACCCTAAAATCAATGGCTGAAAAATTAGCCCCTGAGAAACGTCACAGCTTCGTTCATA
ATGGCCAGAAGGTGTTCGAATGGGACCAAACGCTTGAAGAATTGAACATTTACATAACTCTTCCAGAAAATGTTCCGAAGAAGCTATTTTATTGC
AAGGGTGAGTCTAAGCATTTGGAAGTTGGGATCAAAGGCAATCCACCTTACCTTAATCATGATCTGATGAACCC
ATGGCCAGAAGGTGTTCGAATGGGACCAAACGCTTGAAGAATTGAACATTTACATAACTCTTCCAGAAAATGTTCCGAAGAAGCTATTTTATTGC
AAGGGTGAGTCTAAGCATTTGGAAGTTGGGATCAAAGGCAATCCACCTTACCTTAATCATGATCTGATGAACCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E285493] | SGN-U580617 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T99633 [Download][View] | Facility Assigned ID: TPSBK23TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.938 | Expected Error Rate: 0.0145 | Quality Trim Threshold: 12.5 |
Working
