EST details — SGN-E285041
| Search information |
| Request: 285041 | Match: SGN-E285041 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C71997 | Clone name: cLER-19-N13 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C183371 is on microarray TOM1: SGN-S1-1-8.1.2.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183371 [TUS-42-A1] | Trace: SGN-T195467 | EST: SGN-E394141 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183371 [TUS-42-A1] | Trace: SGN-T195935 | EST: SGN-E394609 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183371 [TUS-42-A1] | Trace: SGN-T196629 | EST: SGN-E395303 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183371 [TUS-42-A1] | Trace: SGN-T196629 | EST: SGN-E399115 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183371 [TUS-42-A1] | Trace: SGN-T200447 | EST: SGN-E399551 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E285041 | Length: 630 bp (870 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E285041 [] (trimmed)
TTTTGTCTTTCTTTCTTGTTAACCCATTTTCTTGATATTTAACAAGAAAAGTTTCTTTCTTTTTTTTCCTACCCTCATAATTGGGTAGAGAACAA
TTCCCATGGCTACTTCTTCAGCTTATCTTTCTTGTCCTGCAACTTCTGCTACTGGAAAGAAACATGTTTTCCCAAATGGGTCACCTGGATTCTTG
GTTTTTGGTGGTACCCGTTTGTCCAACCGGTTAGTGACCCGAAAGTCGGTTATTCGGGCTGATTTGGATTCTATGGTTTCTGATATGAGTACCAA
CGCTCCAAAAGGGCTATTTCCACCCGAGCCTGAACATTATCGGGGGCCAAAGCTGAAAGTAGCTATTATTGGAGCTGGGCTTGCAGGCATGTCGA
CTGCTGTGGAGCTCTTGGATCAAGGACATGAGGTGGATATATACGAATCAAGGACTTTTATTGGTGGGAAAGTGGGTTCTTTTGTTGATAGACGT
GGGAACCACATTGAAATGGGACTGCACGTGTTCTTTGGTTGTTATAATAATCTGTTCCGTCTGTTGAAAAAGGTGGGTGCTGAAAAAAATCTGCT
AGTGAAGGAGCATACTCACACATTTGTAAATAAAGGGGGTGAAATAGGGGAACTTGATTT
TTCCCATGGCTACTTCTTCAGCTTATCTTTCTTGTCCTGCAACTTCTGCTACTGGAAAGAAACATGTTTTCCCAAATGGGTCACCTGGATTCTTG
GTTTTTGGTGGTACCCGTTTGTCCAACCGGTTAGTGACCCGAAAGTCGGTTATTCGGGCTGATTTGGATTCTATGGTTTCTGATATGAGTACCAA
CGCTCCAAAAGGGCTATTTCCACCCGAGCCTGAACATTATCGGGGGCCAAAGCTGAAAGTAGCTATTATTGGAGCTGGGCTTGCAGGCATGTCGA
CTGCTGTGGAGCTCTTGGATCAAGGACATGAGGTGGATATATACGAATCAAGGACTTTTATTGGTGGGAAAGTGGGTTCTTTTGTTGATAGACGT
GGGAACCACATTGAAATGGGACTGCACGTGTTCTTTGGTTGTTATAATAATCTGTTCCGTCTGTTGAAAAAGGTGGGTGCTGAAAAAAATCTGCT
AGTGAAGGAGCATACTCACACATTTGTAAATAAAGGGGGTGAAATAGGGGAACTTGATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E285041] | SGN-U568537 | Tomato 200607 | Build 2 | 54 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T96613 [Download][View] | Facility Assigned ID: TPRCW79TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 14.5 |
Working
