EST details — SGN-E283893

Search information 
Request: 283893Match: SGN-E283893
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C70012Clone name: cLER-13-E6
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C186040 is on microarray TOM1: SGN-S1-1-3.4.7.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C186040 [TUS-48-P6] Trace: SGN-T192770 EST: SGN-E391444 Direction: 3' Facility: INRA
Clone: SGN-C186040 [TUS-48-P6] Trace: SGN-T197685 EST: SGN-E396359 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E283893Length: 497 bp (887 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E283893 [] (trimmed) ACCAAAATAAACAACTACATCTAGCAGCTTCTAAAATACCAAATAAATATAACAGTATAACATTATCATCTATCATCACATCATCCATTGCACAA
ATTGAGCTGTTCTACCAAGTTCCTCAGAACTTGATTTCAAAAAGAAACTCTTCAAGTTGAACAATACAATAAGAAACTCTTGAAAAACTCCAAGT
AGATCAACGATAACGGCGTAGAGACAGAGTTTGGTTCCTCTTCCAGGTTGCCCTTCTTGAGGGTCTTGCCTTGGGGTGCAAGTGTCCTCTTCCTC
GGAGACCCCTGTATTTCTTTCCAGCTGAAGTCAGTCCACGAAGCTCTCTATGCTTGTGCACTGGGTTGCAGATCCAGTTGATTCTTGGGTCATTC
CTTATAGCAGCATGGGCTGAATCAATCAGGATCACTTCAAAGTATTTATATGTTGAATCCTCATTGATCCAGTAAGAGTTGAGGACCTTAAGACC
ACCCAATTTTCTACCAGCACGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E283893] SGN-U565711 Tomato 200607 Build 2 49 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T94587 [Download][View] Facility Assigned ID: TPRBX27TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0127 Quality Trim Threshold: 14.5