EST details — SGN-E283540
| Search information |
| Request: 283540 | Match: SGN-E283540 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C69745 | Clone name: cLER-12-H19 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185992 is on microarray TOM1: SGN-S1-1-3.2.7.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185992 [TUS-48-N6] | Trace: SGN-T192437 | EST: SGN-E391111 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185992 [TUS-48-N6] | Trace: SGN-T197793 | EST: SGN-E396467 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283540 | Length: 555 bp (888 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283540 [] (trimmed)
GTCACGCTCCTCAGTCCTATTGGTTCTCATCGCCGGCCTTTTCGCCGCTACGATTGCCGGAGCGGCGACCTTTGCTGATGAGAATCCCATCAGAC
AAGTCGTCGTTTCGGAAGAAGTGGAGAGCGGAATTCTTCAAGTGGTTGGCGAGAGTGACGACGCTCTCTCCTTTGCTCGCTTTGTTAACAAGTAT
GGGAAAAAGTACGACTCTGTTGAGGAGACCAAGCTAAGGTTTGAGATATTTGTGGAGAATCTGAAGATGATTCGATCACATAACAACAAAAGATC
ATTAGTATCATACAAACTCGGTGTCAATAAGTTTACCGACCTAACATGGGATGAGTTCCGTCGAGTGAAGTTGCAGGGGACACCTCAAAACTGTT
CTGCCACCACAAAGACCAATCTTAAGTTCACTAACGGTCTTCTACCAGAGAAGGTACGTTCAATCAGCAGAATGAACGTACATGTTATATTATAT
TGGTGTACTTGAGCCGAGGGAAATTAATAGTCTACCTTCGCGAGGTAGCGTATATGCATTTTGCGTTGGATATTGGTAAG
AAGTCGTCGTTTCGGAAGAAGTGGAGAGCGGAATTCTTCAAGTGGTTGGCGAGAGTGACGACGCTCTCTCCTTTGCTCGCTTTGTTAACAAGTAT
GGGAAAAAGTACGACTCTGTTGAGGAGACCAAGCTAAGGTTTGAGATATTTGTGGAGAATCTGAAGATGATTCGATCACATAACAACAAAAGATC
ATTAGTATCATACAAACTCGGTGTCAATAAGTTTACCGACCTAACATGGGATGAGTTCCGTCGAGTGAAGTTGCAGGGGACACCTCAAAACTGTT
CTGCCACCACAAAGACCAATCTTAAGTTCACTAACGGTCTTCTACCAGAGAAGGTACGTTCAATCAGCAGAATGAACGTACATGTTATATTATAT
TGGTGTACTTGAGCCGAGGGAAATTAATAGTCTACCTTCGCGAGGTAGCGTATATGCATTTTGCGTTGGATATTGGTAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283540] | SGN-U580519 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T94507 [Download][View] | Facility Assigned ID: TPRBU46TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0083 | Quality Trim Threshold: 14.5 |
Working
