EST details — SGN-E283127
| Search information |
| Request: 283127 | Match: SGN-E283127 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C71413 | Clone name: cLER-17-M21 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178914 is on microarray TOM1: SGN-S1-1-1.3.3.17
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178914 [TUS-30-G8] | Trace: SGN-T184511 | EST: SGN-E371897 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178914 [TUS-30-G8] | Trace: SGN-T184512 | EST: SGN-E371898 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E283127 | Length: 501 bp (640 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E283127 [] (trimmed)
AAATTCTTGAGAACTTTTTGAAACCTTTTTTCTCAATCTCCAATAAAGGGAAAAATGAGGAGGACTTAGAGAAAATTGCAGCACAAGAACAGAAG
CAATTCCCTTTTGAAGTTCTTGTTTCTGCTACCAAAGATTTTCACCCAGATAACAAGCTTGGTGAAGGTGGATTTGGGCCTGTATTCAAGGGGAA
ATTAAGTGATGGGAGGCAAATAGCTGTAAAGAAGCTTTCACATAGTTCAAGGCAAGGGATGAAGGAATTCAAGAATGAAGCTAAGTTGTTGGCTC
GTGTACAACACAGAAATGTGGTGAATTTGTTAGGGTACTGTGTACATGGAGTAGAGAAGTTGCTTGTGTATGAGTATGTTGCTAATGAGAGCCTT
GACAAAATCCTCTTCAAATCTGCTAACAGAGATGCACTCAGCTGGAAGCAACGGCATGACATAATTGTTGGCATTGCTAGAGGGTTGCTATACCT
TCATGGAGGATCACATACTTGCATTA
CAATTCCCTTTTGAAGTTCTTGTTTCTGCTACCAAAGATTTTCACCCAGATAACAAGCTTGGTGAAGGTGGATTTGGGCCTGTATTCAAGGGGAA
ATTAAGTGATGGGAGGCAAATAGCTGTAAAGAAGCTTTCACATAGTTCAAGGCAAGGGATGAAGGAATTCAAGAATGAAGCTAAGTTGTTGGCTC
GTGTACAACACAGAAATGTGGTGAATTTGTTAGGGTACTGTGTACATGGAGTAGAGAAGTTGCTTGTGTATGAGTATGTTGCTAATGAGAGCCTT
GACAAAATCCTCTTCAAATCTGCTAACAGAGATGCACTCAGCTGGAAGCAACGGCATGACATAATTGTTGGCATTGCTAGAGGGTTGCTATACCT
TCATGGAGGATCACATACTTGCATTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E283127] | SGN-U579043 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95978 [Download][View] | Facility Assigned ID: TPRCM83TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0061 | Quality Trim Threshold: 14.5 |
Working
