EST details — SGN-E282949

Search information 
Request: 282949Match: SGN-E282949
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C71407Clone name: cLER-17-M15
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178910 is on microarray TOM1: SGN-S1-1-5.3.3.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178910 [TUS-30-G4] Trace: SGN-T184509 EST: SGN-E371895 Direction: 3' Facility: INRA
Clone: SGN-C178910 [TUS-30-G4] Trace: SGN-T184510 EST: SGN-E371896 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E282949Length: 484 bp (618 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E282949 [] (trimmed) GAAAAGTGTACAAGGTTTAGGGGTTTCAATTGATGTTGTTGTGTCTTGTCTTGCTAGTCGAAATGGTGGGGTAAAAGATTCTTGGAATATCGATT
ATGAGGCAACAAAGAATAGTCTTGTTGCTGGGAGGAAGTTTGGGGCTTCACACTTTGTTTTGCTGTCTGCAATTTGTGTTCAAAAGCCCCTTCTT
GAATTTCAAAGAGCTAAGCTGAAATTCGAGGCGGAATTGATGAAAGAAGCTGAAGAAGATAATGGATTTACTTATAGTATTGTTAGACCTACTGC
ATTTTTCAAGAGCTTAGGAGGTCAGGTTGAATTGGTGAAAGATGGGAAACCTTATGTGATGTTTGGGGATGGAAAGTTGTGTGCTTGCAAGCCGA
TAAGCGAACAAGATTTAGCTTCTTTTATGGCTGATTGTGTACTGAAAGAGGATAAAATCAATCAGGTCTTGCCAATTGGAGGACCCTGGAAGGCA
TTGACACCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E282949] SGN-U586592 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T95800 [Download][View] Facility Assigned ID: TPRCM80TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5