EST details — SGN-E282897
| Search information |
| Request: 282897 | Match: SGN-E282897 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C70589 | Clone name: cLER-15-F10 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178741 is on microarray TOM1: SGN-S1-1-6.4.4.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178741 [TUS-29-P3] | Trace: SGN-T184094 | EST: SGN-E371025 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E282897 | Length: 380 bp (796 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E282897 [] (trimmed)
AAAGATCAAGGAACAGTTGGATGCGGACACAGTCGTAGTGAAAGATGCTTATGGTGATGGTCGGCATGTCAGCATTGATGTAATCGCTACAGCTT
TTGAGGGACAATCAGCTGTGAATAGGCAGAGGATGGTCTACAAAGCCATATGGGAAGAACTTCAGAACACTGTGCATGCAGTCGACCAGATGACT
ACCAAAACACCAACTGAAGCAGCTGCAGGGAAGTGATAGAGGTACAACCTAAGAGTACCAAAACACCACCCCAGTCAACTACTTTATTTTCAAGT
AGCAAAACTTTTCAATTGACACATACAGTTACTATTAAAAAAAAAGAACATTGAATGATGTCAACTTTAAAGTAATATTGCTTTACATTGTTNGT
TTGAGGGACAATCAGCTGTGAATAGGCAGAGGATGGTCTACAAAGCCATATGGGAAGAACTTCAGAACACTGTGCATGCAGTCGACCAGATGACT
ACCAAAACACCAACTGAAGCAGCTGCAGGGAAGTGATAGAGGTACAACCTAAGAGTACCAAAACACCACCCCAGTCAACTACTTTATTTTCAAGT
AGCAAAACTTTTCAATTGACACATACAGTTACTATTAAAAAAAAAGAACATTGAATGATGTCAACTTTAAAGTAATATTGCTTTACATTGTTNGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E282897] | SGN-U566173 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95417 [Download][View] | Facility Assigned ID: TPRCH29THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.938 | Expected Error Rate: 0.0092 | Quality Trim Threshold: 12.5 |
Working
