EST details — SGN-E282896
| Search information |
| Request: 282896 | Match: SGN-E282896 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C70551 | Clone name: cLER-15-D18 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C184455 is on microarray TOM1: SGN-S1-1-4.2.16.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C184455 [TUS-44-N5] | Trace: SGN-T198321 | EST: SGN-E396995 | Direction: 3' | Facility: INRA |
| Clone: SGN-C184455 [TUS-44-N5] | Trace: SGN-T199983 | EST: SGN-E398657 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E282896 | Length: 544 bp (701 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282896 [] (trimmed)
TTTTAGTCCAGGTCCAATGACCCTTGTCTCTACTTTCTTCTCTGAATCTGAGTACCCATCTTTCTCCCAGCTTCTTGCTGGAGCTATGGCTTCTC
CATTAGCAAAACCGCCTACCCTTTTTCCTGGAGAAGAAGAGAATTGTAAACAAGGGTATAAACAGAATCGACCCATGAATCTAATGGTGGCTCAA
TCTCCTTTCTTCACCATTCCAACCGCTTTTACTCCTTCTGGATTGCTTAATTCACCTGGATTTCTTTCCGCAGTTCAGAGTCCTTTTGGAATGTC
ACACCAGCAGGCCCTAGCACATGTTACAGCACAGGCAGCGTTATCCCAGTCTTACTTACAAACTCAAGCTGAATGCCATTTCCCCTCGCAAAGTA
AATCAGTACAAGTATTAGGGGCATCTGACCCAGAGGAGTCTTCTTTACAACCTCAATTAGATACTATGTCGTCAGACCAGAAGAGTAAGAAATTT
GAACTGCCACAGCTTTCGCAATCTGAGGACAAACCATCCTTTAATTCAGTCGATAGACCAGCTTCTGAT
CATTAGCAAAACCGCCTACCCTTTTTCCTGGAGAAGAAGAGAATTGTAAACAAGGGTATAAACAGAATCGACCCATGAATCTAATGGTGGCTCAA
TCTCCTTTCTTCACCATTCCAACCGCTTTTACTCCTTCTGGATTGCTTAATTCACCTGGATTTCTTTCCGCAGTTCAGAGTCCTTTTGGAATGTC
ACACCAGCAGGCCCTAGCACATGTTACAGCACAGGCAGCGTTATCCCAGTCTTACTTACAAACTCAAGCTGAATGCCATTTCCCCTCGCAAAGTA
AATCAGTACAAGTATTAGGGGCATCTGACCCAGAGGAGTCTTCTTTACAACCTCAATTAGATACTATGTCGTCAGACCAGAAGAGTAAGAAATTT
GAACTGCCACAGCTTTCGCAATCTGAGGACAAACCATCCTTTAATTCAGTCGATAGACCAGCTTCTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E282896] | SGN-U570042 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95416 [Download][View] | Facility Assigned ID: TPRCH21THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 14.5 |
Working
