EST details — SGN-E282641
| Search information |
| Request: 282641 | Match: SGN-E282641 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C70525 | Clone name: cLER-15-C14 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178719 is on microarray TOM1: SGN-S1-1-4.3.4.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178719 [TUS-29-O5] | Trace: SGN-T1509 | EST: SGN-E378548 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C178719 [TUS-29-O5] | Trace: SGN-T183870 | EST: SGN-E370529 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178719 [TUS-29-O5] | Trace: SGN-T183871 | EST: SGN-E370530 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E282641 | Length: 476 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282641 [] (trimmed)
CTTCTTCTCACAGTTCTCTCAACTCGCGGCTGCCATGGCAACGGAAACTGTGAACCCAAAAGCATACCCACTTGCTGATTCACAGCTTACAACGA
CGATAATGGATTTGGTTCAACAAGCTGCTAATTATAAGCAGCTTAAAAAGGGTGCTAATGAAGCTACAAAGACACTCAACAGAGGAATTTCAGAA
TTTGTTGTCATGGCCGCAGATACTGAGCCCCTTGAAATCCTTCTTCACCTTCCACTCCTTGCCGAAGATAAGAATGTGCCCTATGTCTTTGTCCC
TTCAAAGCAAGCTCTTGGGCGAGCATGTGGTGTTACCCGCCCCGTCATTGCTTGTTCAGTGACAAGCAACGAGGGAAGCCAGTTGAAATCTCAAA
TACAGCAACTAAAGGATGCCATTGAGAAGCTCCTCATCTAAATGTTGAGCCTTTTGCAGCATGATGGGCCTCAACTTCACTTTTGAGGCTTGGAC
T
CGATAATGGATTTGGTTCAACAAGCTGCTAATTATAAGCAGCTTAAAAAGGGTGCTAATGAAGCTACAAAGACACTCAACAGAGGAATTTCAGAA
TTTGTTGTCATGGCCGCAGATACTGAGCCCCTTGAAATCCTTCTTCACCTTCCACTCCTTGCCGAAGATAAGAATGTGCCCTATGTCTTTGTCCC
TTCAAAGCAAGCTCTTGGGCGAGCATGTGGTGTTACCCGCCCCGTCATTGCTTGTTCAGTGACAAGCAACGAGGGAAGCCAGTTGAAATCTCAAA
TACAGCAACTAAAGGATGCCATTGAGAAGCTCCTCATCTAAATGTTGAGCCTTTTGCAGCATGATGGGCCTCAACTTCACTTTTGAGGCTTGGAC
T
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E282641] | SGN-U577270 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95161 [Download][View] | Facility Assigned ID: TPRCF19THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0309 | Quality Trim Threshold: 12.5 |
Working
