EST details — SGN-E282599
| Search information |
| Request: 282599 | Match: SGN-E282599 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C70578 | Clone name: cLER-15-E21 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178736 is on microarray TOM1: SGN-S1-1-3.3.3.3
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178736 [TUS-29-O22] | Trace: SGN-T184028 | EST: SGN-E371699 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178736 [TUS-29-O22] | Trace: SGN-T184029 | EST: SGN-E371700 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E282599 | Length: 492 bp (775 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E282599 [] (trimmed)
TGGAAATCCTGGAGCACTTGTCCAAAGACCGCTACCTCATGGAGATTCAAATCAAGGTAGGGGTGGAGCTAATGGGAATCGGGGCACAAGAAATA
ATGATCAGCATCAAGATGGGAGATTCTCTGGTCAGAGGGACAAGGGTAGGAACTGGGATAGGCAATCGTCTTTTGGGAGTAGAGGGCCGTCTAGA
GGTGGCTTCAAAAAGAATAATGTGCCCTGCCCATATAATACAAACAATCGATGCATAAAGGGTGATAAATGCAATTATCTTCATGGCTAATCAGG
AGGAAACAGAGTAGTAGTAGGAGAGTAAAGTGATTTTGTACAGTGATTTCGTCTCAGTTGTCTTTTAGTATATAGGTCTGTTCTATAATTGTAAA
CTTGTGCAGATTAGTTGCTCCCCGCCCTCTTCTGATCTGATGCAGTTTTTGCAGTAGCTAGGTTCATCCTGCCTATGTTATCAGCTTCTAATAAA
GCAGACAGCGGGCATTA
ATGATCAGCATCAAGATGGGAGATTCTCTGGTCAGAGGGACAAGGGTAGGAACTGGGATAGGCAATCGTCTTTTGGGAGTAGAGGGCCGTCTAGA
GGTGGCTTCAAAAAGAATAATGTGCCCTGCCCATATAATACAAACAATCGATGCATAAAGGGTGATAAATGCAATTATCTTCATGGCTAATCAGG
AGGAAACAGAGTAGTAGTAGGAGAGTAAAGTGATTTTGTACAGTGATTTCGTCTCAGTTGTCTTTTAGTATATAGGTCTGTTCTATAATTGTAAA
CTTGTGCAGATTAGTTGCTCCCCGCCCTCTTCTGATCTGATGCAGTTTTTGCAGTAGCTAGGTTCATCCTGCCTATGTTATCAGCTTCTAATAAA
GCAGACAGCGGGCATTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E282599] | SGN-U564211 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T95119 [Download][View] | Facility Assigned ID: TPRCE35THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0076 | Quality Trim Threshold: 14.5 |
Working
