EST details — SGN-E281713
Search information |
Request: 281713 | Match: SGN-E281713 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C70462 | Clone name: cLER-14-P10 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C183377 is on microarray TOM1: SGN-S1-1-2.1.2.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C183377 [TUS-42-A7] | Trace: SGN-T195936 | EST: SGN-E394610 | Direction: 3' | Facility: INRA |
Clone: SGN-C183377 [TUS-42-A7] | Trace: SGN-T195936 | EST: SGN-E399120 | Direction: 3' | Facility: INRA |
Clone: SGN-C183377 [TUS-42-A7] | Trace: SGN-T195937 | EST: SGN-E394611 | Direction: 5' | Facility: INRA |
Clone: SGN-C183377 [TUS-42-A7] | Trace: SGN-T195937 | EST: SGN-E399121 | Direction: 5' | Facility: INRA |
Clone: SGN-C183377 [TUS-42-A7] | Trace: SGN-T199400 | EST: SGN-E398074 | Direction: 5' | Facility: INRA |
Clone: SGN-C183377 [TUS-42-A7] | Trace: SGN-T199567 | EST: SGN-E398241 | Direction: 3' | Facility: INRA |
Sequence |
Sequence Id: SGN-E281713 | Length: 267 bp (886 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E281713 [] (trimmed)
TTGGACTGGCTCTGATATTGCAGCTGGATATTGAGGGGATAAGGTCATTTTTCCGCGCATTCTTCCGTGTGCCAAAATGGATGTGGCAGGGATTT
CTTGGTTCAAGTCTTTCTTCAGCAGACCTCATGTTATTTGCCTTCTACATGTTTATTATTGCACCAAATGACATGAGAAAAGGCTTGATCAGACA
TCTTTTATCTGATCCTACTGGTGCAACATTGATAAGAACTTATCTTACATTTTAGAGTAAACTCCTCCTACAATAAT
CTTGGTTCAAGTCTTTCTTCAGCAGACCTCATGTTATTTGCCTTCTACATGTTTATTATTGCACCAAATGACATGAGAAAAGGCTTGATCAGACA
TCTTTTATCTGATCCTACTGGTGCAACATTGATAAGAACTTATCTTACATTTTAGAGTAAACTCCTCCTACAATAAT
Unigenes |
Current Unigene builds | |||||
[SGN-E281713] | SGN-U567885 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T94972 [Download][View] | Facility Assigned ID: TPRCD89THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.931 | Expected Error Rate: 0.0153 | Quality Trim Threshold: 20.5 |