EST details — SGN-C28116

Search information 
Request: 28116Match: SGN-C28116
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C28116Clone name: cLEF-46-J24
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176894 is on microarray TOM1: SGN-S1-1-5.3.8.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E247257Length: 540 bp (940 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E247257 [] (trimmed) GAAAAGAGTTTTGAGTCTTTCAGTTTTGCTCTCCCCTTTTCAAGCTCGTTATCGTCCCAGGCGTTGCCCTGAAGAATAGGTGCAAGTGAAGACCA
AGATGCAAACTGAAAGTGCTTTGTCAGTTACGGGGCCAAGGCCAATGGAGTTGTCTGTTGTGCTTCCTAGGGGTCCGCAAGGACTTGGACCAAAT
GGAAAACCACGGACATCAAGCTTGGAGTCACCAATTATGTTGCTATCTGGACATCAAAGTGCGGTATATACTATGAAGTTCAATCCAGCAGGAAC
AATCATTGCATCTGGTTCACATGACAAAGAAATCTTTCTTTGGAATGTACGTGGTGATTGCAAGAATTTTATGGTCTTGAAAGGGCACAAAAATG
CAGTTCTTGATGTTCAATGGACTACTGATGGATCAACAATAGTATCAGCCAGCCCCGATAAGACTGTTAGGGCATGGGATGTAGAAACAGGGAAA
CAAATAAAGAAAATGGCTGAACATTCCTCGTTTGTTAACTCATGCTGCCCAGCTCGTAGGGGCCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247257] SGN-U563486 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61668 [Download][View] Facility Assigned ID: TMGHB60TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0050 Quality Trim Threshold: 14.5