EST details — SGN-E280603

Search information 
Request: 280603Match: SGN-E280603
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72205Clone name: cLER-1-H23
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C185033 is on microarray TOM1: SGN-S1-1-2.2.12.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185033 [TUS-46-F7] Trace: SGN-T200098 EST: SGN-E398772 Direction: 5' Facility: INRA
Clone: SGN-C185033 [TUS-46-F7] Trace: SGN-T200108 EST: SGN-E398782 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E280603Length: 449 bp (726 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280603 [] (trimmed) CAGCTTAAGATCATTGCTTCCGGAGAAGGTTGCTGAGCTATCAGAACCAACATCCCTGGAAGTAAAGGAGACCATCCGTTCAGTAGTCCATGGAC
TACTCGCAACTCTATCCCCCAGAATGCATTCTAAGGCTCCTGATCTATCAGAAAATAACTCTGCAGGAACTGTAAATGTTGGAGCTGAAGATTCC
ATCGATCTTGTTGAGAACACATCCATTCACTTCCAACCTCAGATATCATTGACTCGAGATTATTTGGCTCGTCTGTTGTTTTGGTGCATGCTACT
AGGGCACTATCTTAGGGGTCTAGAATACCGGGTGGAGCTTACTGAACTGTTATCCTTGCCATGTGGGTTAAAGAACGAAGGTTTGAGCAATTAGC
AAGTTGATTACACTTGTTTTTAGCCAAACAAGGCCAAGAAAGGTTTCAATAAGCAAGTTGATGGAGCAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280603] SGN-U576132 Tomato 200607 Build 2 67 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92157 [Download][View] Facility Assigned ID: TPRAC48TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.985 Expected Error Rate: 0.0118 Quality Trim Threshold: 14.5