EST details — SGN-E280584
| Search information |
| Request: 280584 | Match: SGN-E280584 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72077 | Clone name: cLER-1-B23 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185906 is on microarray TOM1: SGN-S1-1-1.2.7.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185906 [TUS-48-J16] | Trace: SGN-T1910 | EST: SGN-E378655 | Direction: 5' | Facility: Giov. Lab |
| Clone: SGN-C185906 [TUS-48-J16] | Trace: SGN-T197791 | EST: SGN-E396465 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280584 | Length: 471 bp (730 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E280584 [] (trimmed)
GCACTAAAGCAGTACTTTGCAGGAGGCACAGACACTTCAGGGTTGGGAAGAGGTTCTCTTATTGTAGCAGGTGGCCTGGCTGGTGGTTCCTTCTG
GATTTCGGTGTATCCAACAGACGTGATCAAGAGTGTAATCCAAATCGATGACTATAAAAACCCAAAATTCTCTGGCTTTTTTGATGCATTCAAGA
AGATCTTGGCATCGGAGGGAGTCAAAGGCCTTTACAAGGGCTTTGGACCTGCTATGGGACGTAGTGTCCCTGCAAATGCTGCATGTTTCTTGGCG
TATGAGATGGCTAAGTCTAGTTTGGGATAATTCATTGTTGATGGGGAAGGATTTTAGACATTGGTATTGATAATTCTTTGAACCTAACATCTGCT
GATATTCTGTAATTTCCAGTTCAACTTATTCTGCTTTTATAGATTTAGGCCATTTTTTTCTTTGGTGGCTTCAAGAAGCAAATTGTCTTTC
GATTTCGGTGTATCCAACAGACGTGATCAAGAGTGTAATCCAAATCGATGACTATAAAAACCCAAAATTCTCTGGCTTTTTTGATGCATTCAAGA
AGATCTTGGCATCGGAGGGAGTCAAAGGCCTTTACAAGGGCTTTGGACCTGCTATGGGACGTAGTGTCCCTGCAAATGCTGCATGTTTCTTGGCG
TATGAGATGGCTAAGTCTAGTTTGGGATAATTCATTGTTGATGGGGAAGGATTTTAGACATTGGTATTGATAATTCTTTGAACCTAACATCTGCT
GATATTCTGTAATTTCCAGTTCAACTTATTCTGCTTTTATAGATTTAGGCCATTTTTTTCTTTGGTGGCTTCAAGAAGCAAATTGTCTTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280584] | SGN-U577891 | Tomato 200607 | Build 2 | 33 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92138 [Download][View] | Facility Assigned ID: TPRAC12TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0115 | Quality Trim Threshold: 14.5 |
Working
