EST details — SGN-E280530

Search information 
Request: 280530Match: SGN-E280530
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72347Clone name: cLER-1-O19
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178670 is on microarray TOM1: SGN-S1-1-5.1.4.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178670 [TUS-29-M4] Trace: SGN-T183939 EST: SGN-E371610 Direction: 3' Facility: INRA
Clone: SGN-C178670 [TUS-29-M4] Trace: SGN-T183940 EST: SGN-E371611 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E280530Length: 463 bp (865 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E280530 [] (trimmed) TTGAACAAAAAAATAATAATTAAGAATGGGTTCCAAGGCAATTTTGTTTCTTGGTCTTTTTTTGGCTATTTTCTTAATGATAAGCTCTGAGGTTG
CAGCTAGGGAGTTGGCAGCTGAGACTACCAATGCGGTGAAATTGGATAACGAGAATGCAGTAAACGTCGATCATTATTATGGCAAGGGCTATGGC
AAACGTAAGAAATGTTACAGTTGCTGCAAAAAATACAAATATGGATGCAAAAAATACTGCTGCTCTTATGAAGAATATGTTGCTGCCCAGACTCA
AAACTAAATAATTAATTAGCGCTTAATTATGTGTATTTATTATTATTGTAAACTTTTGAAATTAAGTGACAAGATAATAATAATCTTGCTACTTA
ATTAAGACCCTTTGCTTGTAACAAGTATGAATAAAGCCATTCATTTACGTACTATGAATGGTTGGTCATGATGTAATGTTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280530] SGN-U578947 Tomato 200607 Build 2 200 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T92084 [Download][View] Facility Assigned ID: TPRAA94TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.934 Expected Error Rate: 0.0094 Quality Trim Threshold: 12.5