EST details — SGN-E280523
| Search information |
| Request: 280523 | Match: SGN-E280523 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72339 | Clone name: cLER-1-O11 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178662 is on microarray TOM1: SGN-S1-1-5.4.3.2
See unigene SGN-U579745 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C72339 [cLER-1-O11] | Trace: SGN-T92076 | EST: SGN-E280522 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C178662 [TUS-29-L20] | Trace: SGN-T184222 | EST: SGN-E371455 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178662 [TUS-29-L20] | Trace: SGN-T184223 | EST: SGN-E371456 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280523 | Length: 600 bp (823 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E280523 [] (trimmed)
CAGATTTTAAACAATTCTTCCAAAATCATTCTTCACAATTGATTCAAGAAGTATTCGTTAACTTACAGGAAGTAATAACATAGTAGAGAAAAATT
TTCTAGCCCAGGTTGGCCAAAACATCATTTAAGGTAGTTACAGTTTCAGCATAGTACTTCTGTGCTTCAGCACTGTTCTTGGTCTTTGCTGCATG
GTCCAGATCACTAATGGTCTTAAAGAGCTTTCCAGACAGATCCTGGAGTTTTCCCTTCTGTTCTTTTGGCATAGCAGAGATAACAGTCTTAAGGT
CATAGCGAAGGTATTCTGCTCTGAGACGAAGGTCATTCTGGACGTAAGGCCAGGCCTTCTTGTCGATGAAATCCTTGACACTAACAATCTCCTTG
GCTGAATCCTTAACTCTCTGGGCTGCCTCAGCTGGAGTCAACGGTTGAAGGTAAAACCTATTCTTCAATGGCAAACTGAAGTCCCTTGCCTCATC
TGAGTTCAAAGTTCCAGGCAATCCACCCGAGGGAGGAGGTGGGGGGCCAACCTTAATTGACCTGGCTTCAGCAAAAGCTGCTTTAGCAACGGAAC
CAGCTAGGCCAGCAGCAACAAGACCAATCA
TTCTAGCCCAGGTTGGCCAAAACATCATTTAAGGTAGTTACAGTTTCAGCATAGTACTTCTGTGCTTCAGCACTGTTCTTGGTCTTTGCTGCATG
GTCCAGATCACTAATGGTCTTAAAGAGCTTTCCAGACAGATCCTGGAGTTTTCCCTTCTGTTCTTTTGGCATAGCAGAGATAACAGTCTTAAGGT
CATAGCGAAGGTATTCTGCTCTGAGACGAAGGTCATTCTGGACGTAAGGCCAGGCCTTCTTGTCGATGAAATCCTTGACACTAACAATCTCCTTG
GCTGAATCCTTAACTCTCTGGGCTGCCTCAGCTGGAGTCAACGGTTGAAGGTAAAACCTATTCTTCAATGGCAAACTGAAGTCCCTTGCCTCATC
TGAGTTCAAAGTTCCAGGCAATCCACCCGAGGGAGGAGGTGGGGGGCCAACCTTAATTGACCTGGCTTCAGCAAAAGCTGCTTTAGCAACGGAAC
CAGCTAGGCCAGCAGCAACAAGACCAATCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280523] | SGN-U579745 | Tomato 200607 | Build 2 | 181 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92077 [Download][View] | Facility Assigned ID: TPRAA90TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0084 | Quality Trim Threshold: 14.5 |
Working
