EST details — SGN-E280470
| Search information |
| Request: 280470 | Match: SGN-E280470 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72055 | Clone name: cLER-1-A19 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178428 is on microarray TOM1: SGN-S1-1-7.3.4.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C72055 [cLER-1-A19] | Trace: SGN-T92023 | EST: SGN-E280469 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C178428 [TUS-29-C2] | Trace: SGN-T183887 | EST: SGN-E371558 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178428 [TUS-29-C2] | Trace: SGN-T183888 | EST: SGN-E371559 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280470 | Length: 491 bp (797 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E280470 [] (trimmed)
GCCCCCCCTTTCAACTTCAAGAAGGACCGTGATGGCTACTGGAAGTGGTTTGCTGGAAACCTTGCATCAAGAGGTGCTGCTGGTGCTTCCTCTTT
GGTCTTTGTCTACTCCTTGGACTATGCTCGTACCCGTCTTGCTAATGATGCCAAGGCTTCAAAGAAGGGAGGTGAGAGGCAGTTCAATGGTTTGG
TTGATGTCTACAGGAAGACACTCAAATCTGATGGAATTGCTGGTCTATACCGTGGATTCAACATTTCATGTGTTGGTATCATTGTTTACCGTGGT
TTGTACTTAGGAATGTACGACTCCTTGAAGCCTGTCCTCTTGACAGGAAACCTGCAGGATAGTTTCTTTGCTAGCTTTGCTCTTGGTTGGCTCAT
CACCAATGGTGCTGGTCTTGCTTCTTACCCCATTGATACAGTAAGATGAAGAATGATGATGACATCTGGTGAGGCGGTGAAGTACAGGAGCTCGC
TTGATGCATTCTCCCA
GGTCTTTGTCTACTCCTTGGACTATGCTCGTACCCGTCTTGCTAATGATGCCAAGGCTTCAAAGAAGGGAGGTGAGAGGCAGTTCAATGGTTTGG
TTGATGTCTACAGGAAGACACTCAAATCTGATGGAATTGCTGGTCTATACCGTGGATTCAACATTTCATGTGTTGGTATCATTGTTTACCGTGGT
TTGTACTTAGGAATGTACGACTCCTTGAAGCCTGTCCTCTTGACAGGAAACCTGCAGGATAGTTTCTTTGCTAGCTTTGCTCTTGGTTGGCTCAT
CACCAATGGTGCTGGTCTTGCTTCTTACCCCATTGATACAGTAAGATGAAGAATGATGATGACATCTGGTGAGGCGGTGAAGTACAGGAGCTCGC
TTGATGCATTCTCCCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280470] | SGN-U577960 | Tomato 200607 | Build 2 | 307 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T92024 [Download][View] | Facility Assigned ID: TPRAA10TV |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0142 | Quality Trim Threshold: 20.5 |
Working
