EST details — SGN-E280370
| Search information |
| Request: 280370 | Match: SGN-E280370 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72259 | Clone name: cLER-1-K16 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185295 is on microarray TOM1: SGN-S1-1-4.1.10.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185295 [TUS-47-A5] | Trace: SGN-T192288 | EST: SGN-E390962 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280370 | Length: 652 bp (824 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E280370 [] (trimmed)
TCAATTTGTGAGTTATCTTCTTCAGAATTCTCTCTGTTCATCAATCATGGTTGTTGAAGTTTGTGTCAAGGCTGCTGTGGGTGCCCCTGATGTCC
TTGGAGACTGTCCATTTAGCCAAAGGGTACTTCTGACATTGGAGGAAAAGAAAGTGACTTACAAGAAGCACTTGATCAATGTTAGTGACAAGCCC
AAATGGTTCTTGGAGGTGAACCCTGAAGGGAAAGTTCCCGTGATCAATTTTGGTGACAAATGGATCCCAGATTCTGATGTCATTGTTGGGATTAT
TGAAGAGAAATACCCAAATCCCTCTCTCATTGCTCCCCCTGAATTTGCCTCTGTGGGCTCGAAAATATTTCCTACCTTCGTCTCATTTCTGAAGA
GCAAGGATTCTAGTGACAGTACTGAGCAGGCTCTCCTTGATGAACTAAAGGCTTTGGAAGAGCATCTCAAGGCTCATGGACCATATATCAATGGG
CAGAATGTTTGTTCAGTTGATATGAGCTTGGCTCCAAAACTGTACCATCTCGAGGTGGCTCTTGGACACTTCAAGAAGTGGAGTGTGCCTGAAAG
CTTGAGTCATGTGCGTAACTACATGAAGCTGCTCTTCGAGCGAGAGTCGTTCCAGAAAACCAAGGCTGAAGAGAAGTACGTC
TTGGAGACTGTCCATTTAGCCAAAGGGTACTTCTGACATTGGAGGAAAAGAAAGTGACTTACAAGAAGCACTTGATCAATGTTAGTGACAAGCCC
AAATGGTTCTTGGAGGTGAACCCTGAAGGGAAAGTTCCCGTGATCAATTTTGGTGACAAATGGATCCCAGATTCTGATGTCATTGTTGGGATTAT
TGAAGAGAAATACCCAAATCCCTCTCTCATTGCTCCCCCTGAATTTGCCTCTGTGGGCTCGAAAATATTTCCTACCTTCGTCTCATTTCTGAAGA
GCAAGGATTCTAGTGACAGTACTGAGCAGGCTCTCCTTGATGAACTAAAGGCTTTGGAAGAGCATCTCAAGGCTCATGGACCATATATCAATGGG
CAGAATGTTTGTTCAGTTGATATGAGCTTGGCTCCAAAACTGTACCATCTCGAGGTGGCTCTTGGACACTTCAAGAAGTGGAGTGTGCCTGAAAG
CTTGAGTCATGTGCGTAACTACATGAAGCTGCTCTTCGAGCGAGAGTCGTTCCAGAAAACCAAGGCTGAAGAGAAGTACGTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280370] | SGN-U583361 | Tomato 200607 | Build 2 | 92 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91924 [Download][View] | Facility Assigned ID: TPRAB68TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0039 | Quality Trim Threshold: 14.5 |
Working
