EST details — SGN-E280369

Search information 
Request: 280369Match: SGN-E280369
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C72258Clone name: cLER-1-K14
cartOrder Clone
Library Name: cLEROrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4 weeks

Microarray: Alias clone SGN-C178596 is on microarray TOM1: SGN-S1-1-7.2.4.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C178596 [TUS-29-J2] Trace: SGN-T184275 EST: SGN-E371508 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E280369Length: 522 bp (828 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E280369 [] (trimmed) GGTAATGGTAAACACTTATTTTATGACCTATACAAGGCACAAAATGAAAGTGCAATGTAGGTTCAAAAAAGTACAAGTCGGCTTACGCATACGCG
CACACAAAAAATTCAATAAAAAGAGAACGTTTTACGATACAACAAACACTTGACTCACAGACAAGGATGAAGGATAGGAAGGAAAAAAAAGAGCA
CACCACAAAGCAAAAAGGTTACAAAAGGAGTGTTACTTGGGGCCTATATTTATTAACCTACTAGTAATACATAGGCCATATTTTGCTCCTCAGTC
TACGAGGTATTAGCAGCCATTTCCAACTATTGTTCCCCCTTCCTTTCAACGCGATACTCACCCATCCGCCACTAAACTTACTGTTTTGACAACTC
AATTGTCTTAGACCAAGCTGGCCTAGCCAAAATATCAGCAACCCAAGCGCTAACATGAGGCCTAGCATCGAACAAGCTCTTCACTTTACTCCCCG
ACAAGTAGTGCAAAGACGGGGCGTGGTGCAAATCAGCTAGGGTGAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E280369] SGN-U579307 Tomato 200607 Build 2 87 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T91923 [Download][View] Facility Assigned ID: TPRAB67TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.942 Expected Error Rate: 0.0074 Quality Trim Threshold: 14.5