EST details — SGN-E280356
| Search information |
| Request: 280356 | Match: SGN-E280356 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C72135 | Clone name: cLER-1-E16 |
| ||
| Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C178499 is on microarray TOM1: SGN-S1-1-8.2.4.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178499 [TUS-29-F1] | Trace: SGN-T184048 | EST: SGN-E370979 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178499 [TUS-29-F1] | Trace: SGN-T184049 | EST: SGN-E370980 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E280356 | Length: 557 bp (825 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E280356 [] (trimmed)
AACATTCCTAAGAAGTAAACCATTGACAGTAGTTCCACGGGCATCGAAAAGGAAGAGTAAACCTCACTGATTTTTAAGGCCTGAACCATGATATG
AAATAAGTCGATAAAGTCTAAATCCAATTTCCAAAATTCGAAAGGTAAATGCGCAATATGTGACTCACCTGACGATCTTATTCTAAATAGTATCT
CGGTAGACAACCACTATGTTTATATCCTTTCTTTCTCATACAAAGTGCTTATACACTTAACAAAACCACTTTTTCTTTGAACAGTAAAGAGAGAA
CCAAATAAAAAACGGGTCCGGCCCTCCTCAGTATCACCTAGGAAGAGGCCATTGATTGGAATAGAAAATTTAGTAAGAATTAGGTTCGAATAAAT
TTCCTGGGATCCTTTTCCTTTCGAACTACAAACATGGGAATCGCTGAAATAGTTCTTTGATTGAAAGAGGCTGATTCCTATAATACATTACTCCA
GTCGAGTCCAATGGAATTTCAAAATGAAGATATTTTTATTTTGTTCCAAACGTGTTGCAAAACCATCTAGAAAGCAATTGAT
AAATAAGTCGATAAAGTCTAAATCCAATTTCCAAAATTCGAAAGGTAAATGCGCAATATGTGACTCACCTGACGATCTTATTCTAAATAGTATCT
CGGTAGACAACCACTATGTTTATATCCTTTCTTTCTCATACAAAGTGCTTATACACTTAACAAAACCACTTTTTCTTTGAACAGTAAAGAGAGAA
CCAAATAAAAAACGGGTCCGGCCCTCCTCAGTATCACCTAGGAAGAGGCCATTGATTGGAATAGAAAATTTAGTAAGAATTAGGTTCGAATAAAT
TTCCTGGGATCCTTTTCCTTTCGAACTACAAACATGGGAATCGCTGAAATAGTTCTTTGATTGAAAGAGGCTGATTCCTATAATACATTACTCCA
GTCGAGTCCAATGGAATTTCAAAATGAAGATATTTTTATTTTGTTCCAAACGTGTTGCAAAACCATCTAGAAAGCAATTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E280356] | SGN-U579372 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91910 [Download][View] | Facility Assigned ID: TPRAB32TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.951 | Expected Error Rate: 0.0082 | Quality Trim Threshold: 14.5 |
Working
